| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4359 |
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| Symbol | |
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| ID | 3970836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4861321 |
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| End bp | 4862154 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927468 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_534201 |
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| Protein GI | 90425831 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0982104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.010155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTG AGCCACGACC GAACGCGCGG GAGCTGCTGG CGTTCTATCT CGAAGCCGGC
GTCGACTGCG CGTTGATGGA TGAGCCGGTC AACCGGCTGC TCGACGACAT CGCGCCGGAG
CCGGCGCGTC CGCCGGCCGA GCCGCGCCTG GTTTCGCCGC AGCCGCAGCC GGCCACGCCG
CGCGCCGTGC CGACAGCCGC GGCGCCCGCG CTTGCGCCGG ATGCGGCAAT TCTGTCGGCG
CGCGAGGCGG CGCGCACCGC GCCGTCGCTG CAAGCCTTGC GCGAGCTGCT GGCGGCGTTC
GACGGCTGCG CGCTGAAGGC CACCGCGACC CAACTGGTGT TTGCCGACGG CAATCCGCAG
GCCCGCATCA TGCTGGTTGG CGAGGCGCCC GGCCGCGAAG AGGACATCGA AGGGCTGCCG
TTCGTCGGCC GTTCCGGCAA GCTGCTCGAT CGCATGCTGG CTTCGATCGG GCTCGACCGC
AGCACGGTCT ATATCGCCAA CGTGATTCCG TGGCGACCGC CCGGCAACCG CACGCCGACG
CCGCAGGAAA CCCAGACCTG CCTGCCGTTC ACCCAGCGCC AGATCGAACT GGTCGATCCG
GATCTCCTGG TGACGCTCGG CAATCCGTCG ACCCAGACCC TGCTGGCGAC CCGCGAGGGC
ATCATGAAGA CTCGCGGCCG CTGGGTCGAT TACGACACCG GGTCGCGCCG CATCCGCGCG
CTGCCGACGT TTCATCCGGC CTATCTGTTG CGCTCGCCAT CCTACAAGCG GATGGCCTGG
CAGGATCTGC GCGCCATCGC CAAGGCGCTG GAAGATTTGC CGCCGAAGGC GTGA
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| Protein sequence | MTPEPRPNAR ELLAFYLEAG VDCALMDEPV NRLLDDIAPE PARPPAEPRL VSPQPQPATP
RAVPTAAAPA LAPDAAILSA REAARTAPSL QALRELLAAF DGCALKATAT QLVFADGNPQ
ARIMLVGEAP GREEDIEGLP FVGRSGKLLD RMLASIGLDR STVYIANVIP WRPPGNRTPT
PQETQTCLPF TQRQIELVDP DLLVTLGNPS TQTLLATREG IMKTRGRWVD YDTGSRRIRA
LPTFHPAYLL RSPSYKRMAW QDLRAIAKAL EDLPPKA
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