| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4348 |
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| Symbol | glyS |
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| ID | 3971228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4847977 |
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| End bp | 4850163 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927457 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_534190 |
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| Protein GI | 90425820 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.314297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00562302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGATC TTCTGCTCGA ATTGTTCTCC GAAGAAATCC CGGCCCGGAT GCAGGCGAAA
GCCGCCGAGG ATTTGCGCCG CATGGTGACC GACAAGCTGG TCGCCGAGGG GCTGGTCTAT
GACGGCGCGA AAGCGTTTGC GACGCCGCGG CGGCTCGCGC TCACCGTGCA CGGCATTCCG
GCGCGGCAGT CGGATCTGAA AGAGGAGCGC AAGGGCCCGC GGGTCGGCGG GCCGGACGCC
GCGATCCAGG GCTTTTTGAA AGCCACGGGG CTCGCCTCGC TCGACGAAGC AAAGATCCAG
CGCGACCCGA AGAAGGGCGA TTTCTACATC GCATTGATCG AGAAGCCCGG CCGCGCCACG
CTCGACGTGC TGGCGGATAT CCTGCCGGTG ATCGTGCGCA CCTTCCCGTG GCCGAAATCG
ATGCGCTGGG GCGAGCGCTC GGCCAAGCCC GGCGCGCTGC AATGGGTGCG GCCGCTGCAT
TCGATCGTCG CCACCTTCGG CATCGACACC GAAGATCCCG ACGTGGTGGC GTTCGACGTC
AGCGGCATCA AGGCCGGCCA AGTCACCCGC GGCCATCGCT TTATGGCGCC CGGCGAAATC
TCGGTGCGCC GCTTCGAGGA TTACGACGCC AAGCTGTTCG ACGCCAAGGT CGTGCTCGAT
CCGCAGCGCC GCAAGGATAT CATTCTGCAC GACGCCCGCA CGTTGGCGCA GGCGCAGAAT
TTCGAACTGG TCGAGGACCC GGTGTTGCTC GACGAAGTGT CGGGCTTGGT CGAATGGCCG
GTGGCGCTGA TGGGCTCGTT CGACCCGGCG TTCCTGGCGA TCCCCGGCGA AGTGATCCGC
GCCACCATCC GCAACAACCA GAAGTGTTTT GTGGTCTCGG ACCCCGCGAC CGGCAAGCTC
ACCAACAAAT TCATCCTCAC CGCCAACATC GAAGCGTCCG ACGGCGGCAA GGCGATCGTC
GCCGGCAACG AGCGGGTGAT CCGCGCGCGG CTGTCGGATG CGAAGTTCTT CTACGAGACG
GACCTCAAGA CCAAGCTGGA AGACCGGCTG CCGAAATTTG CGCAGATCGT ATTTCACGAA
AAGCTCGGCA CCCAGGCCGA GCGCATCGCG CGGATCGAAC GGCTGGCGGC GGAGATCGCG
CCGCTGGTGG GCGCCGATGT CGAGAAGGCG CGCCGCGCCG CGCAGCTGTG CAAGGCGGAT
CTGCTCACCG AAGTGGTCGG CGAATTCCCC GAGCTGCAGG GCCTGATGGG CAAGTACTAC
GCGCTGGCGC AAGGCGAGGA CGCCAGCGTC GCTGCCGCCT GCGAGGAGCA CTACAAGCCG
CAGGGGCCGA ATGATCGCGT GCCGAGCGAT CCGGTAAGCA TCGCCGTGGC GCTGGCCGAC
AAGATCGATA CGTTGGTGGG CTTCTGGGCG ATTGATGAGA AGCCGACGGG AAGCAAGGAC
CCCTATGCGC TGAGGCGGGC GGCGCTGGGG GTGATTAGGT TGATCTTGGA GAACAATATC
AGACCAAATT TGATCTCAGC TTTCGAAGGG CATTCGAGTG CTGTGGATCA GACAACGATG
AGAATAGCGC AAACGAAGGC GAAAAGTTCG GGGGGATTCT CTCTCGTCTT GAATGCGCAT
TCGACCCAAT CATGGAATGA CCGTCAGACC CGCACGACCA GCGTCGATCT TCTCTCCTTC
TTCGCCGACC GCCTCAAAGT CCAACTCCGC GAGCAAGGCG CCCGGCACGA CCTCGTCGAT
GCCGTGTTCG CGCTCGAAGG GCAGGACGAT ATCCTGATGA TCGTCCGCCG CGTCGAGGCG
CTGGCGGCGT TTCTCGCGAC CGACGACGGC AAGAATTTGC TCGCCGGCGT CAAGCGCGCC
GCCAACATCC TGCGCATCGA GGAGAAGAAA GACGCCCGCG CCTTCGACGG TGCGCCGGAC
GCTTCGCTCT ATGTCGCCGA CGAGGAAAAG ACCCTCGCCA CCGCGATCGA TCAGGTGAAG
CTTGAGGCGT CGAGCGCCGT CGCGAGGGAA GACTTCGCCG CCGCGATGAG CGCGATGGCC
AAGCTGCGGC CTGCGGTCGA TGCGTTCTTC GACAAGGTGA AGGTCAACGA CGACGACGCC
CGCGTGCGCG ACAACCGCCT GAAGCTACTC AACGAGATCC GCGCCGCCAC CCGCGCAGTA
GCGGATTTCT CCAAGATCCA GGATTAG
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| Protein sequence | MPDLLLELFS EEIPARMQAK AAEDLRRMVT DKLVAEGLVY DGAKAFATPR RLALTVHGIP
ARQSDLKEER KGPRVGGPDA AIQGFLKATG LASLDEAKIQ RDPKKGDFYI ALIEKPGRAT
LDVLADILPV IVRTFPWPKS MRWGERSAKP GALQWVRPLH SIVATFGIDT EDPDVVAFDV
SGIKAGQVTR GHRFMAPGEI SVRRFEDYDA KLFDAKVVLD PQRRKDIILH DARTLAQAQN
FELVEDPVLL DEVSGLVEWP VALMGSFDPA FLAIPGEVIR ATIRNNQKCF VVSDPATGKL
TNKFILTANI EASDGGKAIV AGNERVIRAR LSDAKFFYET DLKTKLEDRL PKFAQIVFHE
KLGTQAERIA RIERLAAEIA PLVGADVEKA RRAAQLCKAD LLTEVVGEFP ELQGLMGKYY
ALAQGEDASV AAACEEHYKP QGPNDRVPSD PVSIAVALAD KIDTLVGFWA IDEKPTGSKD
PYALRRAALG VIRLILENNI RPNLISAFEG HSSAVDQTTM RIAQTKAKSS GGFSLVLNAH
STQSWNDRQT RTTSVDLLSF FADRLKVQLR EQGARHDLVD AVFALEGQDD ILMIVRRVEA
LAAFLATDDG KNLLAGVKRA ANILRIEEKK DARAFDGAPD ASLYVADEEK TLATAIDQVK
LEASSAVARE DFAAAMSAMA KLRPAVDAFF DKVKVNDDDA RVRDNRLKLL NEIRAATRAV
ADFSKIQD
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