Gene RPC_4335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4335 
Symbol 
ID3971215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4831922 
End bp4832899 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID637927444 
Producthypothetical protein 
Protein accessionYP_534177 
Protein GI90425807 
COG category[R] General function prediction only 
COG ID[COG4111] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.229695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AGCTACCGAC GCCGATCGAG ATCGGGCTGA CCGCCGCCAT CGTGGCGATC 
GAGGACAACG AGCCGTTGAT CCTCACCGCG TCCGGCGGCG ACGGCGAAAA TCTCGCCGGC
CTGCCCTATG GCCCGTTCGA GGCGGTGACG CATCGCACCT TCGAGATCGG CCTGCGCGCC
TGGGTGGAAG AACAGACCGG GCTGCGGCTC GGCTATGTCG AGCAGCTCTA CACCTTCGGC
GACCGCGGCC GCCACGCCCG GATCGGCGAC ACCGACGTCC ATGTCGCCTC GATCGGCTAT
CTGGCACTGA CGCGGGCCGC CGACAACGTA TCGCGGGCGC CGGGCGCCAG CTTCGAGCCC
TGGTACCGCT ATTTCCCCTG GGAAGACTGG CGCGCCGCAC AGCCCGACAT CATCGCCCGC
GCCATCATCC CCGAACTCAC CGCCTGGGCG GCCGAGGCCG AGACGCCTGA CACCGCGCGC
GCGCTGGGGC GCAAGGACCG GGTGCGGTTG TTCTTCGGCG TCGACGGCGC GCAATGGGAT
GAGGAGCGCG TGCTCGACCG CTACGAGCTG TTGTACGAAG CTGGACTGAT CGAGGAAGCG
CGCCGCGACG GCCGCCCTGC GGCGCTGGCG CGGAACACTA TCCCACTACT TGGCGTCCCG
ATGCGGTTCG ATCACCGGCG GATTCTCGCC ACCGCGATCG CGCGGTTGCG TGCCAAACTG
AAATATCGCC CGGTGGTGTT CGAACTGCTG CCGCCGGAAT TCACCCTGAC CGAATTGCAG
CGCACCGTGG AGGCGATCTC CGGCCGGCAT CTGCACAAGC AGAATTTTCG CAGGCTGGTC
GAGGCCGGCG CGCTGGTCGA GCCGACCGGC GAAATGTCGA CCCACACCGG CGGCCGCCCG
GCGGCGCTGT TCCGCTTCCG CCGCGAAGTG CTGCAGGAAC GCCCGGCGCC CGGACTGCGG
GTGCGCGGAC GGCGGTGA
 
Protein sequence
MSDKLPTPIE IGLTAAIVAI EDNEPLILTA SGGDGENLAG LPYGPFEAVT HRTFEIGLRA 
WVEEQTGLRL GYVEQLYTFG DRGRHARIGD TDVHVASIGY LALTRAADNV SRAPGASFEP
WYRYFPWEDW RAAQPDIIAR AIIPELTAWA AEAETPDTAR ALGRKDRVRL FFGVDGAQWD
EERVLDRYEL LYEAGLIEEA RRDGRPAALA RNTIPLLGVP MRFDHRRILA TAIARLRAKL
KYRPVVFELL PPEFTLTELQ RTVEAISGRH LHKQNFRRLV EAGALVEPTG EMSTHTGGRP
AALFRFRREV LQERPAPGLR VRGRR