| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4304 |
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| Symbol | |
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| ID | 3973905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4804623 |
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| End bp | 4805594 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927412 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_534146 |
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| Protein GI | 90425776 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.328087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0388954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAT TGACCGCATG GAAAGTCCCC GCCTCGGCGC AGCCGCGCGC CGAGGATTAC
AGCTTCGACC TCGACCACGT GCTGACTTCG GTGGTCGGCC TGCATTCGAT CATCCCCGGT
GACGCCTTCA CCGCCGACAC GCTCGGCGTC GAACGCGCCG GCAACGGCGT GGTGATCGAT
CACGGCCTGG TGCTGACCAT CGGCTATCTG ATCACCGAGG CGGAGACGGT GTGGCTGCAT
CTCGGCGACG GCCGCATCGT CGAGGGCCAC GCGCTCGGCT TCGACCAGGA TTCCGGCTTC
GGCCTGGTGC AGGCGCTGGG CGAGCTCGAT ATCGATCCGA TGCCGATCGG CAGTTCGGCG
GCGGCCTCGG TCGGCGACCG CGTGGTGGTC GGCGGCGTCG GCGGCCGCGA ACGCTCGGTC
GCGGCGCAGA TCGCCGCCAA GCAGACCTTC GCGGGCTATT GGGAATATCT GCTGGACGAG
GCGATCTTCA CCGCGCCGGC GCATCCGAAC TGGGGCGGCG CGGCGATGAT CTCGGAGGCC
GGCGAATTGA TCGGGATCGG CTCGCTGCAG ATCGAGCGCG AGCATTCCGG CCGCGACGAA
CATCTCAACA TGATCGTGCC GATCGACCTG CTGAAGCCGA TCCTGGAGGA TCTGCGCAAA
TTCGGCCGGG TCAACGTCGC CCCACGGCCC TGGCTCGGGC TGTATTCCGC CGAGATCGAG
GACAAGATCG TGGTGGTGGG GATCGCGCCG AAGGGCCCGG CGGCGCGCGC CGAACTGAAG
ACCGGCGACG TCATCCTGGC GGTGCGCGGC GAGAAGGTGT CGAGTTCGGA GGAATTCTAT
CGCAAATATT GGGCGCTCGG CACCGCGGGC GTCGACGTGC CGCTGACGCT GTACCGCGGC
GGCGATACTT TCGATGTCGA ACTGGTGTCC TCGGACCGCA ACAAGTTTTT GAAGAAACCG
CGGATGCATT AG
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| Protein sequence | MPSLTAWKVP ASAQPRAEDY SFDLDHVLTS VVGLHSIIPG DAFTADTLGV ERAGNGVVID
HGLVLTIGYL ITEAETVWLH LGDGRIVEGH ALGFDQDSGF GLVQALGELD IDPMPIGSSA
AASVGDRVVV GGVGGRERSV AAQIAAKQTF AGYWEYLLDE AIFTAPAHPN WGGAAMISEA
GELIGIGSLQ IEREHSGRDE HLNMIVPIDL LKPILEDLRK FGRVNVAPRP WLGLYSAEIE
DKIVVVGIAP KGPAARAELK TGDVILAVRG EKVSSSEEFY RKYWALGTAG VDVPLTLYRG
GDTFDVELVS SDRNKFLKKP RMH
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