Gene RPC_4295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4295 
Symbol 
ID3971575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4794678 
End bp4795520 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID637927403 
Producthypothetical protein 
Protein accessionYP_534137 
Protein GI90425767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.28527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0411245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA GGTTTTCCGC GCCGTATCAG ACGGAGCCGG TGTCCAGTCT CGCGCTGTGG 
GCGCGGCGGC TGGCGGTGTT TTCCGTGGTC GCCACGCTGA CCTCGATCGG CATCGTGCGG
TTCGGCTTTC TCGAGGTGAA GCCGGCGCTG GCGACGTTCT TCGCAGCACT CGGCATCGCC
GGGCTGTCGA TCCTGGTGGC GCTGGCCGGC TTCGTGGCGA TCTGGCAGAA CGGCTCGCGC
GGCATGGGCA TGATCCTGCT GGCGCTGACG CTCGACGTCG CGATCCTGGC CTATCCGGGC
TATCTCGGGC TGCAATATCG CCGGCTGCCG CCGCTCCACG ACATCACCAC CGACCCGATC
GATCCGCCGA AATTCGAGGC GTTGGCGCGG CTCAGAGTCG GCGACGGCAC CAACACCGCG
GTCTATGCCG GGCTGTACTC CGCCGAACAG CAACGCGCGG CCTGGCCGGA GATCGAAACC
GTGCAGCTCG ATGTGCCGGT GCAGAAGGCC TACGACGTCA CGCTGGAATT GATCACCAAG
CGCAAATGGC GGATCGTCGA CGCCCGCGCG CCGCAGCCGC CGCGCCGCGA AGGCAAGATC
GAGGCGGTGG CGCGCACGCT GATCATGGGG TTTCGCGAGG ACGTCGCGAT CCGCGTGTTG
CCCGACGGCG ACGGCTCGCG GGTCGATATC CGCTCCTCGT CGCGCTATTT CGAAAGCGAC
CTCGGCAGCA ACGCCGCGCG CGTCACGAAA TTGATCGACG ACATCAACAC CGCCGCCGAC
AACGCAGCAC TCGCCAAGAA GCCGGCGGAG CCGGCCAAGG GCGCGGTGAA GGGGAAGAAG
TAG
 
Protein sequence
MARRFSAPYQ TEPVSSLALW ARRLAVFSVV ATLTSIGIVR FGFLEVKPAL ATFFAALGIA 
GLSILVALAG FVAIWQNGSR GMGMILLALT LDVAILAYPG YLGLQYRRLP PLHDITTDPI
DPPKFEALAR LRVGDGTNTA VYAGLYSAEQ QRAAWPEIET VQLDVPVQKA YDVTLELITK
RKWRIVDARA PQPPRREGKI EAVARTLIMG FREDVAIRVL PDGDGSRVDI RSSSRYFESD
LGSNAARVTK LIDDINTAAD NAALAKKPAE PAKGAVKGKK