| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4270 |
|---|
| Symbol | |
|---|
| ID | 3971693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4754773 |
|---|
| End bp | 4756239 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927374 |
|---|
| Product | protein of unknown function DUF463, YcjX-like protein |
|---|
| Protein accession | YP_534113 |
|---|
| Protein GI | 90425743 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3106] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.700297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.502362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCA ATTTCTCCAA TATCGTCGAG GAAGCCCGGC TGTCGGCGCG GGCGTTGCTC
GATTACAGCG ACAATCTGTT CAACCCGACC ATCAGGCTGG GCGTCACCGG CCTGTCGCGT
GCCGGCAAGA CCATCTTCAT CACCGCGCTG GTGCACGGCC TGTCGCGCGG CGGCCGCTTC
CCGATCTTCG AGTCCATGGC GAGCGGCCGG ATTGCCAAGG CACGTCTAGA ACCCCAGCCG
GACGATGCGG TTCCCCGGTT CGATTACGAA CATCACCTCA GAACGCTGAT CGACGAGCGC
AATTGGCCGC ACTCAACCGT CGACATCAGC GAATTGCGCC TCGTCATCGA TTATCAGCGC
AAGAACGGCG CCAATCGCAC GCTGACCATC GATATCGTCG ATTATCCCGG CGAATGGCTA
CTCGACCTGC CATTGTTGAA CCAGACATAC GAGCAATGGG CGGCGGAAAG CCTTAAGCTG
TCGATGCAGG ACCCACGGGT GCGGCTGGCC GGCGAATGGC ACGCCCATCT CGCCACGCTG
CAGCCCAAAG GCCGCGAAAA CGAACAGACC ACGCTGACTG CTGCGCGGCT GTTCACCAAA
TATCTGCGCG AATGTCGCGA CGAACAGTTC GCCATGAGCC TGTTGCCGCC CGGCCGCTTC
CTGATGCCGG GCAATCTCGC CGGCTCGCCG GCCTTGACCT TCGCGCCGCT CGACGTGCCC
GCCAATGGCG AGGCGCCGGA CGGCACGCTG TGGGCGATGA TGCGGCGCCG CTTCGAGGCC
TACAAGGACG TGGTGGTGCG GCCGTTCTTC CGTGACCACT TCTCACGGCT GGACCGCCAG
ATCGTGCTGG TGGACGCGCT GACCGCGTTC AACGCCGGTC CGGAGGCGTT GCACGACCTG
GAATCGGCGC TCGCCGGCAT TCTGGATTGC TTCCGGATCG GCCGCAGTTC GCTGCTGAAT
TCGATGTTCC GGCCGAAGAT CGACCGCATC CTGTTCGCCG CCACCAAGGC CGACCACCTG
CACCACGCCA GCCACGACCG GCTGGAAGCG ATCCTGCGCC GGCTGGTCGA GCGCGCCGCG
GGCCGCGCCG AATACGCCGG CGCCGCGGTC GACGTGGTGG CGCTGTCCGC GGTGCGCGCC
ACCCGCGAGG CCCAGGTGCA GCGCGGCCAC GACCGGTTGC CCTCGATCGT CGGCACGCCG
ATCGCCGGCG AAACCTCCGG CGGCGACATT TTCGACGGCG AGACCGAGGT GGCGACCTTC
CCCGGCGACC TGCCGACCAA TCTCGAGGAG ATTTTCAAGG CCGGCGCGTT TCGCGGATTG
GCCGCCGGCG ACGCCGAATA CGCCGACTAC CGCTTCCTCC GGTTCCGGCC GCCGCATATT
GCCGATCGCG GCCCGGATGA TACCATCCTG CCTCACATCC GCCTCGACCG CGCGCTCCAG
TTCCTGATCG GAGACAGACT GCAATGA
|
|---|
| Protein sequence | MAFNFSNIVE EARLSARALL DYSDNLFNPT IRLGVTGLSR AGKTIFITAL VHGLSRGGRF
PIFESMASGR IAKARLEPQP DDAVPRFDYE HHLRTLIDER NWPHSTVDIS ELRLVIDYQR
KNGANRTLTI DIVDYPGEWL LDLPLLNQTY EQWAAESLKL SMQDPRVRLA GEWHAHLATL
QPKGRENEQT TLTAARLFTK YLRECRDEQF AMSLLPPGRF LMPGNLAGSP ALTFAPLDVP
ANGEAPDGTL WAMMRRRFEA YKDVVVRPFF RDHFSRLDRQ IVLVDALTAF NAGPEALHDL
ESALAGILDC FRIGRSSLLN SMFRPKIDRI LFAATKADHL HHASHDRLEA ILRRLVERAA
GRAEYAGAAV DVVALSAVRA TREAQVQRGH DRLPSIVGTP IAGETSGGDI FDGETEVATF
PGDLPTNLEE IFKAGAFRGL AAGDAEYADY RFLRFRPPHI ADRGPDDTIL PHIRLDRALQ
FLIGDRLQ
|
|---|
| |