| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4260 |
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| Symbol | |
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| ID | 3972913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4743346 |
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| End bp | 4744884 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927364 |
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| Product | hypothetical protein |
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| Protein accession | YP_534103 |
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| Protein GI | 90425733 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.44702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGTG CGGAAAGTCT GGTGCGAACC CTGGTGGCCG GCGACGTCGA CGTCTGCTTC
GCCAATCCCG GCACTTCCGA GATGCATTTT GTCGCAGCCT TGGATCGGGT CGAGGGCATG
CGTTGCGTGC TCGGGCTGTT CGAAGGCGTG GTGACCGGCG CCGCCGACGG CTATTTCCGG
ATGCGGAACA AGCCGGCCTC GACGCTGCTG CATCTCGGTC CGGGCCTCGC CAATGGCCTG
GCCAATCTGC ACAACGCCAA GAAGGCCAAT TCCGGCATCG TCAACATCGT CGGCCAGCAC
GCCACCTATC ACATCGATTA CAACGCGCCG CTGACCTCGG ATATCGAAGG CCTGGCGCGG
CCGATGTCAG CCTGGCTGCG CACCTCGCCG GACGCGCAAG CGGTGGCGAG GGACGGCGCG
GCTGCGATCG CCGCAGCCCG CCACGCCCAG ATCGCGACGC TGATCCTGCC CGCCGATACC
GCTTGGAACG AGGCCGACGG CATCGCCGCG GTGCCGGAGG ACAGGCAGCG CGCCAGCTAT
TCGCGCGAGG CGGTGGAAGC CGCCGCCAAG ATCCTGCGCA CGGGCGAGTC GACGCTGCTG
CTGATGACCG GCGGCGCGCT GACCGAGCGT GGCCTGTCGA TGGCTTCGCG GATCGCCGGC
AAGACCGGCT GCAAGGTGAT GGGCCAGACC TACAATCCGA AGATGGCGCG TGGTCGCGGC
CGCTTCGCGA TCGACCGGAT TCCTTACGTG ATCGAGCAGG CGCTGCCGAT CCTGAAGGAT
TTCCGCCACA TCATTTTGGT CGAGGCCAAT GATCCGGTGG CGTTCTTCGC CTATCCGAAC
AAGCCGAGCC TGCTCAAACC CGAAGGCTGC GAGGTGCATC GCATGACCGA TCCGGGCGAG
CATTCGGTGG CGGCGCTGGA AGCCTTGGCC GGCGTGCTCG GCGCCAAAGC GCCCGACGCC
CAGCCGCAGC CGATGGTCGA ATTGGTGAAG CCGGTCGGCG CCTTGACCCA TGCGGCGATC
GCGATGGCGA TCGCGGTGGC GATCCCCGAG CACGCCATCG TGGTCGATGA ATCGATCACC
ACCGGCCGCG GCTTCTTCCC GCCGACCGCG GCTTCGGCGC CGCACGATTG GCTGCAGAAC
ATGGGCGGTT CGATCGGCTT CTCCACGCCG GTCGCCACCG GCGCCGCGGT GGCCTGTCCG
GATCGCAAGG TGATCTGCAT GGTCGGCGAC GGCTCGGCGA TGTACACGCT GCAATCGCTG
TGGACCCAGG CGCGCGAAGG CCTCGACGTC ACCACCATCG TGTTCGCCAA CCGCAATTAT
CAGATCCTGA AGGGCGAATT CGCAGGCGTC GGCGCCGGCG AGATGGGCGC ACGCGCCATG
GACATGCTCA GCATCGACCG GCCGACGCTG GATTGGCCGG CGCTCGCCAA GGGCATGGGG
GTGCCGGCGC GCTCGGTGGC CACGGCCGAA GCGTTCGTCG CCGCGCTGGC GGAGGCGGTG
GCCGAGCCGG GGCCAAGACT GATCGAAGTG GTGATGTGA
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| Protein sequence | MNGAESLVRT LVAGDVDVCF ANPGTSEMHF VAALDRVEGM RCVLGLFEGV VTGAADGYFR
MRNKPASTLL HLGPGLANGL ANLHNAKKAN SGIVNIVGQH ATYHIDYNAP LTSDIEGLAR
PMSAWLRTSP DAQAVARDGA AAIAAARHAQ IATLILPADT AWNEADGIAA VPEDRQRASY
SREAVEAAAK ILRTGESTLL LMTGGALTER GLSMASRIAG KTGCKVMGQT YNPKMARGRG
RFAIDRIPYV IEQALPILKD FRHIILVEAN DPVAFFAYPN KPSLLKPEGC EVHRMTDPGE
HSVAALEALA GVLGAKAPDA QPQPMVELVK PVGALTHAAI AMAIAVAIPE HAIVVDESIT
TGRGFFPPTA ASAPHDWLQN MGGSIGFSTP VATGAAVACP DRKVICMVGD GSAMYTLQSL
WTQAREGLDV TTIVFANRNY QILKGEFAGV GAGEMGARAM DMLSIDRPTL DWPALAKGMG
VPARSVATAE AFVAALAEAV AEPGPRLIEV VM
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