Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4248 |
Symbol | |
ID | 3971590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4729941 |
End bp | 4730600 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927351 |
Product | hypothetical protein |
Protein accession | YP_534091 |
Protein GI | 90425721 |
COG category | [S] Function unknown |
COG ID | [COG5385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.486254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.949249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGCA CCCCGATATC TGCCCCCGTC TCCGTCCCCG CTCCCGATGC GCTGGAACTC GCGGCGCTGT TGTGTTCGCG GGTCTGCCAC GATTTGATCA GCCCAGTCGG CGCCATCGTC AATGGCCTCG AAGTGCTGGA TGACAGTCCG AAGCAGGAAG ATCGCGAATT TGCGCTCGAT CTGATCCGCA AGAGCGCGCG CACCGCCTCG GCGCGATTGC AGTTCTGCCG GCTGGCGTTC GGCGCGGCCG GCTCGGCCGG CGCGCAGATC GACCTCGGCG ATGCGCAGAA CATGGCGCGC GGCCATCTCG AGGACGACAA GACCAAGATC GAATGGAATT TGCCGCGCAT TCTGTTGCCG AAGAACAAGG TCAAGCTGCT GTTGAACATG CTGGTGATCG CCCAGCAGAC GATTCCGCGC GGCGGCGTGC TGACGGTCGA AGCGGTGGGC GAGGGCGATG CGATGGGCTT CCGCGTCGCG GCGTCCGGAT TGAACGCCCG CACCCAGACC AACATCGTCG ACATGCTGAG CGGCGCGCAT GCCGGCTCGA TCGATGCCCA TGCGGTGCAG CCTTACTACA CGCGGCTGTT GGCGCAGGCC TGCGGCTTCA GCGTGTCGCT GGCGCCGGCA GGCGAAGCCG TGGTGGTGAC GGCCTCCTGA
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Protein sequence | MSGTPISAPV SVPAPDALEL AALLCSRVCH DLISPVGAIV NGLEVLDDSP KQEDREFALD LIRKSARTAS ARLQFCRLAF GAAGSAGAQI DLGDAQNMAR GHLEDDKTKI EWNLPRILLP KNKVKLLLNM LVIAQQTIPR GGVLTVEAVG EGDAMGFRVA ASGLNARTQT NIVDMLSGAH AGSIDAHAVQ PYYTRLLAQA CGFSVSLAPA GEAVVVTAS
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