Gene RPC_4206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4206 
Symbol 
ID3972661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4677101 
End bp4678231 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content71% 
IMG OID637927308 
Productglycosyl transferase, group 1 
Protein accessionYP_534049 
Protein GI90425679 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.488817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGC TGCATGCCTA CAAGGCCTAC CGCCCGGACG TCGACGGCGG TGTCGCGGCG 
GTCATCGCGC TGCTCACCGC GGCGGGCGAG GAGGATCTTC GCAGCGAAAT TCTGGTGGCG
CGCGGGATGC GCGGGCTCGG GCAGAGCACC GCGTTCGACG GCGTGCCGAG CCGCGCGGTG
GCCTCGCTCG GCAACCTGTT CGGCATGCCG ATCGCGCCGC AATTTCCGCT GGCGCTGGCG
TGGGCGATCC GCAAGGCCGA CGTCGTCGCC TTGCATGCGC CGTTTCCGCT CAACGACATC
GGCGCGCTCG CCGTTCCCGA CCATGTCGGC GTGGTGGTGC ACTGGCACGC CGAGATCCTC
GGCCGTCGGT TGCTGGCGGG GGCGCTGGCG CCCTTGACGC GGGCCACGCT CGCCCGTGCC
GACCGCATCA TCGTGTCCGA CCAGATCATC GCGCAGAACT CGGCGTTGCT GCGGCCGCAT
CTCGCCAAAT GCGAAGCGGT GCCGTTCGGC GTCGATGCCG CGGCATGGGC GACGCTCGGT
GCCGATGGCT GCGCGCGCGC CGAGGCGCTG CGGCGTCGCC ATCCGCGGCT GATCGTGGCG
CTCGGCCGGC TGGTGCCCTA CAAGGGCTTC GACGTTCTGC TCGCGGCTCT GCCCCGAATC
GATGGCCATC TCAGCATCGT CGGCACCGGC GCGGAGCGCG AACGTCTCGC ACAGATCGCA
GCCGATGCCG GCGTCTCCAA TCGCGTGACC TTCGCCGGCT ATCTGTCGGC GGAGGAGGTG
CGGGTGCATT TGCGCGCGGC GCGGGTGTTC GCCTTCCCCT CGGTGACGGC CGCGGAAACC
TTCGGCATTT CCCAGCTCGA GGCGATGGCG GCCGGCTTGC CGATCGTCAA CACGGCGTTG
CCGACCGCGG TGCCGCTGGT GGCGCGCCAT GGCCTGGAGG CGCTGACGGT GCCGCCGCGC
GACGCCGCCG CGCTCGCCAG CGCGATCAAC GCCGTCCTCG ATGATCCGGA GCTGGCCGAG
CGCCTCGGCC GCGCGGCGCA GGCGCGGGCG CGCGAGCAAT TCGACCACGC AAGGTTCTGC
GCGAGGGTCC GCGCCATCTA CCGCGAGGTG TATGACGCAA GACGAGGATG A
 
Protein sequence
MRVLHAYKAY RPDVDGGVAA VIALLTAAGE EDLRSEILVA RGMRGLGQST AFDGVPSRAV 
ASLGNLFGMP IAPQFPLALA WAIRKADVVA LHAPFPLNDI GALAVPDHVG VVVHWHAEIL
GRRLLAGALA PLTRATLARA DRIIVSDQII AQNSALLRPH LAKCEAVPFG VDAAAWATLG
ADGCARAEAL RRRHPRLIVA LGRLVPYKGF DVLLAALPRI DGHLSIVGTG AERERLAQIA
ADAGVSNRVT FAGYLSAEEV RVHLRAARVF AFPSVTAAET FGISQLEAMA AGLPIVNTAL
PTAVPLVARH GLEALTVPPR DAAALASAIN AVLDDPELAE RLGRAAQARA REQFDHARFC
ARVRAIYREV YDARRG