Gene RPC_4199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4199 
Symbol 
ID3972654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4668448 
End bp4669554 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID637927301 
Productglycosyl transferase, group 1 
Protein accessionYP_534042 
Protein GI90425672 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC ACATCATCGC CCGCGACATC CAGCGCTTCG ACGCGGTCGG AAACTTCTGC 
CGGCAGATCC ACGCCTTGCT GCTCGCGCAA GGCTATGACG CGAGCCTCGC CGCGGAGAAC
TGCCACCCAG ACGATCGGGC GCTGATCGCA AAAATGCCCG AGACGATCGG CACGATCGGC
GCTGACGATC TGGTGATCTT GCATTTCTCG ACCGAAGACC CGGCGTTTCC GGCCATCGCG
GCACTTCCCT GCGCCAAGAT TCTGTACTTC CACAACATCA CTCCGGAGCG CTTCTTCGCC
GGCATCGACG AGCGTACCGC GGGACTGGTC CGTCAGGGGC TGCAGCAGCG CCCGCTCGCG
GCGGGCTTCG ACGTGCTGAT GGCCAATTCG CGTGCCACCG CGCAGGTGCT GCACGACGGC
CTTCCGCCGC AGGACCAGCG GCGCATCACT GAGGCCGCGA TCGTCGCCTG TCCGCCGCTG
ATCGGTGCCG ACCGCTGGGA CGGCATTGTC GACCAGCCTT CGAACGCCGA TGCCGATGCG
CGAACCGTTC TCTATGTCGG GCGGCTGGTG CCGCATAAGG GCGTGACGCA ATTGCTCGAC
GGCTTTGCGA CGCTGGCCGC GCACGATGCC GGCGTCCGCC TGGTCTGCGT CGGCGGCCCG
CCCGACCAAG CCTATGCCGC GGTGCTCTCG GCCCGGATCG CGGCGCTGCC GCCGTCGATC
GCGCAGCGCA TTGAATTCCT CCACGGGCTA TCCGACGGCG CGCTGAAATC GCTCTACCGC
AACGCCGGCG TCTGCGCGTC GATGAGCCGG CACGAGGGCT TCGGCGTGCC GCTGCTCGAC
GCGCTGTCGT TCGACAAGCC GCTGGTGATC AATTCCGAAG CCGGCATGAT CGAAACCGCG
GGCGATGCCG CGCTCGTCGT CGACGCGTCG GATGCCGAGG CGGTCGCCAA TGCGCTCGCC
GCCGCACTCG ACGACGAGGC CACGCGCGCG CAGCTCGGCG CGGCGCGGCG CCTGCGCCTG
CCGGCGCTGC GTCGCCAGGC CGACGGACAC CTCATCCTCA ACGCCGTGAC CCAAGCCAGG
ACCCTACATC GTGCGCGTAT TGTTTAG
 
Protein sequence
MRIHIIARDI QRFDAVGNFC RQIHALLLAQ GYDASLAAEN CHPDDRALIA KMPETIGTIG 
ADDLVILHFS TEDPAFPAIA ALPCAKILYF HNITPERFFA GIDERTAGLV RQGLQQRPLA
AGFDVLMANS RATAQVLHDG LPPQDQRRIT EAAIVACPPL IGADRWDGIV DQPSNADADA
RTVLYVGRLV PHKGVTQLLD GFATLAAHDA GVRLVCVGGP PDQAYAAVLS ARIAALPPSI
AQRIEFLHGL SDGALKSLYR NAGVCASMSR HEGFGVPLLD ALSFDKPLVI NSEAGMIETA
GDAALVVDAS DAEAVANALA AALDDEATRA QLGAARRLRL PALRRQADGH LILNAVTQAR
TLHRARIV