Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4064 |
Symbol | |
ID | 3973345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4514523 |
End bp | 4515038 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927168 |
Product | NADH dehydrogenase subunit I |
Protein accession | YP_533909 |
Protein GI | 90425539 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0149353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAT GGCTGGAAGC GCTGTTGCGC GTCGGCCGCA AGCTCGCGGC CAAGACGGTG ACGGTGCAAT ATCCGGAAGT GAAGCCGCAA TTGCCGCCGC GCAGCCGCGG CCGCATCGTC TTGACCCGCG ATCCCGACGG CCAGGAGCGC TGCGTCGCCT GCAATCTTTG CGCAGTGGCC TGTCCGGTCG GCTGCATCGA TCTGTCGAAG GCGGTGGCCG AGGACGGCCG CTGGTATCCC GAGCACTTCC GAATCAATTT TGCGCGCTGC ATCTTCTGCG GCTATTGCGA GGAGGCCTGT CCGACGGCCG CGATCCAGCT GACGCCGGAT TTCGAATTGA GCGAGTGGCG GCGCGACGCG CTGGTCTATG ACAAGAAGGA TCTGCTGATC GCCGGTGAGG GCAAGGTGCG CGGCTATCGC TATTGGTCGG TCGCCGGCAA GGCGATCACG GGGAAGGACA AGGGCGATGC CGAGCACGAG GCGCCGCCCG TAGATTTGAA GGGACTACGA CCCTGA
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Protein sequence | MIGWLEALLR VGRKLAAKTV TVQYPEVKPQ LPPRSRGRIV LTRDPDGQER CVACNLCAVA CPVGCIDLSK AVAEDGRWYP EHFRINFARC IFCGYCEEAC PTAAIQLTPD FELSEWRRDA LVYDKKDLLI AGEGKVRGYR YWSVAGKAIT GKDKGDAEHE APPVDLKGLR P
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