| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4061 |
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| Symbol | |
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| ID | 3969310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4511754 |
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| End bp | 4513724 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927165 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_533906 |
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| Protein GI | 90425536 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.26931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGG CCAGCCTGCT GCCCTTCGTC CCGGTCTCCG CGCTGCTCGG CTTCGTGCTG
CTGGCGCTGG CGCCGCTGCG GATTTCGCGC GGCGTCGTGA TCGGCCTCGG CGTCGGCGCG
GCGATCGTGC CGGTGCTGCT GTTGCTGCCG GTGGTGGTGT CCTGCTTCGG CGGCGGCTGC
GAAACCGGCG CGGTGGCGAC GATCCTGACC ATTCATGTCG GCGCGCTTGC CGCGCAAATC
GCAATGTCGC TCGATCCGTT GAGCGTGGTT GCCGGCATCA CCGTCGCGGT GGTCGGCGCC
TTGGTGATGA TCTATGCCGG CGCCTATATG AGCGAGGAGC CGGTCGACGA CCTGCGGCGG
TTCTTCGCCT ATATGAACCT GTTTCTCGCC GGCATGTTGG CGGTGGTGCT GGCCGCCGAC
GTGCTCTTGC TGTTTCTCGG CTGGGAAACC ATCGGGCTGT GCAGTTTCTT CCTGATCGCC
TACACCACGC AGCGGCCGAA GGCGGTGGCC GCCGGCACCA AGGCGCTGGT CACCACCCGC
GTTGCCGACA CCATGCTGCT CGCCGGGCTG ATGCTGCTGT TCCTGGCGAC CGGCACCACG
CGGTTCGACG GCATGCTGGC CGGCGTCGGT GCGATCGACG CCTGGCAGCT GGCGGCGATT
GCAGGATTGA TCGCGATCGG CGCGCTCGGC AAATCGGCGC AGATCCCGTT TCACACCTGG
CTGCCGAGCG CGATGGCCGG ACCGACGCCG GTGTCGGCGC TGCTGCATTC CGCCACCATG
GTGGCGGCCG GCGTGATCCT GCTGGTGCGG CTGGCGCCGC TGTTCGCCGC AGCCCCGGAA
ATCTCGGCCT GCGTCGCCGT GCTCGGGCTC GCCACCGCGA TGCTGGCGGC GCTGGCAGCG
TTGCTGCAGA CCGACGTCAA GAAGCTGTTG GCGTTCTCTA CCATGAGCCA GATCGGCTTT
ATGGTGCTGG CGCTCGGCAT CGGCGCACCG GCCGCGGCCT TGGCGCATTT CGCGATTCAC
GCGGTGTTCA AGTCGTTGCT GTTTCTCAGC GCCGGCATCA TGAGTCACGG CGCGCACGGC
GACACCGACA TCAACGCGCT GCGCGGCTCA CGGCGCCGCC AGCCGCTGGC GTTCTGGACG
TTCGCGATCG GCGCCGCGGC ACTCGCCGGT CTGCCGCTGG TCACCGCCGG CTGGTACTCC
AAAGAAGCCA TGCTCGGCGC GGTGCTGAGC AGCGGATTGT GGGGCGTGCC GCTGTGGGCG
CTGGCGGTCG CGGCCGTGGT GCTGACCGGC ACCTACAGTT TTCGCGTGGT GTTTGTTGCG
GCGAGCCGGG GTCCGGACAA GTCGATCGCA CCGTGGGAAG GGCTTGCGGT CTGGGCGCCG
TTGATCGCGC TGGCAGTGCT GGCGTTGCTC AGCGGTTTCC TGGTCAATGC GCTGATCAGC
TTCGATGGCG GCACGCTGAA TGATCCGTCG TTGATTGCCG AACTGCTCGG CGCAGCGGCG
CCGCTCGCAG GCGTCGCGTT GGCGCGGCAT CTGGTGGTTT ATCCGCAACT GCTCGACCAG
CTCAGGGCCA AGCTGCGGCA TCGCAAGGTG TTCCGCATCG ACAGCCTGTA TTACTTCATT
TTGGTGCGCG GCTTCCGCAA GCTTAGCCAC GTCATGGCGG GGCCGAGCGG GGAGCAGGCG
GCGGTCGCTC AAGTCGAAGA GGCGCCCCCG TTCGACGTGG TGAAGCTGGT GGCCGGCGAT
CCGATCGGCC GCGCGCTGGT CGCTGCGGCG ACGCGGTTGG TGCAGGCCGT GGTCAGGGTG
TTCGATCCCG ACCGGATCGA CCTTTTGTGG ATGCGGTTTG CGCGGTCGCT CGGGCGGGCC
TGGGAGCATG TGCACCGAAT CCAGACCGGC CGGGTGCGGG ATCAATCGCT GGGCTTGGCG
CTCGGCTTCG CTGGACTTCT GTTGTTTGCC TGGGGGACGT CATGGCGCTG A
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| Protein sequence | MSMASLLPFV PVSALLGFVL LALAPLRISR GVVIGLGVGA AIVPVLLLLP VVVSCFGGGC
ETGAVATILT IHVGALAAQI AMSLDPLSVV AGITVAVVGA LVMIYAGAYM SEEPVDDLRR
FFAYMNLFLA GMLAVVLAAD VLLLFLGWET IGLCSFFLIA YTTQRPKAVA AGTKALVTTR
VADTMLLAGL MLLFLATGTT RFDGMLAGVG AIDAWQLAAI AGLIAIGALG KSAQIPFHTW
LPSAMAGPTP VSALLHSATM VAAGVILLVR LAPLFAAAPE ISACVAVLGL ATAMLAALAA
LLQTDVKKLL AFSTMSQIGF MVLALGIGAP AAALAHFAIH AVFKSLLFLS AGIMSHGAHG
DTDINALRGS RRRQPLAFWT FAIGAAALAG LPLVTAGWYS KEAMLGAVLS SGLWGVPLWA
LAVAAVVLTG TYSFRVVFVA ASRGPDKSIA PWEGLAVWAP LIALAVLALL SGFLVNALIS
FDGGTLNDPS LIAELLGAAA PLAGVALARH LVVYPQLLDQ LRAKLRHRKV FRIDSLYYFI
LVRGFRKLSH VMAGPSGEQA AVAQVEEAPP FDVVKLVAGD PIGRALVAAA TRLVQAVVRV
FDPDRIDLLW MRFARSLGRA WEHVHRIQTG RVRDQSLGLA LGFAGLLLFA WGTSWR
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