Gene RPC_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3994 
Symbol 
ID3969340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4445582 
End bp4446037 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content59% 
IMG OID637927098 
ProductMaoC-like dehydratase 
Protein accessionYP_533839 
Protein GI90425469 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.270876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCTTTGAAGA TCTCGCCGTC GGCGACGCCA TCGATGGCCC GGAATTTGCA 
GTCAGCCGGG CCTCGATCCG GCTGTTTTGT GACGGCTCGC TCGACTACAA TCCGCTGCAT
CTCGACGACG ATTATATGAA AGGTGATTTC GGCAAGACCA ATTTCGGCGG CATCATCATG
CACGGCATGA ATAATTTCGG ACTGATCACC CGCATGATTA CCGATTGGGC CTATCCGGCG
GGGGCTATTC ACCGGCGCCT GGAAACCCGC TGGGTGAAGC CGGTGCGGCC TGGTGATACC
ATCCGGCCGC GTGGTATCAT CAAGTCAAAA CAGACGACGG AACGCTCGCG TTGGGTTATC
ATCGATGTGC TGGTCTGCAA TCAGCAGGGC GACAAGGTCG CCACCGGCGA GGCGATGGTG
GAATTCCCGC ATGGTGCACA GTCTGCGGCG GGGTGA
 
Protein sequence
MTTTFEDLAV GDAIDGPEFA VSRASIRLFC DGSLDYNPLH LDDDYMKGDF GKTNFGGIIM 
HGMNNFGLIT RMITDWAYPA GAIHRRLETR WVKPVRPGDT IRPRGIIKSK QTTERSRWVI
IDVLVCNQQG DKVATGEAMV EFPHGAQSAA G