Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3994 |
Symbol | |
ID | 3969340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4445582 |
End bp | 4446037 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637927098 |
Product | MaoC-like dehydratase |
Protein accession | YP_533839 |
Protein GI | 90425469 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.270876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGA CCTTTGAAGA TCTCGCCGTC GGCGACGCCA TCGATGGCCC GGAATTTGCA GTCAGCCGGG CCTCGATCCG GCTGTTTTGT GACGGCTCGC TCGACTACAA TCCGCTGCAT CTCGACGACG ATTATATGAA AGGTGATTTC GGCAAGACCA ATTTCGGCGG CATCATCATG CACGGCATGA ATAATTTCGG ACTGATCACC CGCATGATTA CCGATTGGGC CTATCCGGCG GGGGCTATTC ACCGGCGCCT GGAAACCCGC TGGGTGAAGC CGGTGCGGCC TGGTGATACC ATCCGGCCGC GTGGTATCAT CAAGTCAAAA CAGACGACGG AACGCTCGCG TTGGGTTATC ATCGATGTGC TGGTCTGCAA TCAGCAGGGC GACAAGGTCG CCACCGGCGA GGCGATGGTG GAATTCCCGC ATGGTGCACA GTCTGCGGCG GGGTGA
|
Protein sequence | MTTTFEDLAV GDAIDGPEFA VSRASIRLFC DGSLDYNPLH LDDDYMKGDF GKTNFGGIIM HGMNNFGLIT RMITDWAYPA GAIHRRLETR WVKPVRPGDT IRPRGIIKSK QTTERSRWVI IDVLVCNQQG DKVATGEAMV EFPHGAQSAA G
|
| |