| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3973 |
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| Symbol | |
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| ID | 3969396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4422764 |
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| End bp | 4425397 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927077 |
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| Product | hypothetical protein |
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| Protein accession | YP_533818 |
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| Protein GI | 90425448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0974285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.211682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGA CGACGCCCAA TGCAGATGAC GACGAGCGTC CATGGCGCGA TAAATTCCAC
GCCGTGTTCG CCAAGGAAAT CGAAGCCATC AACAGCCGCC GCGAAGCGAC GCGGAAGCTC
GCAACGCCCG CCTCCGGCAA GACCCTCGAC GCCGTTGGTC TCGCTCTGTC CGGCGGCGGC
ATCCGCTCGG CGTCGGTCTG TCTCGGCGTG GTGCAGGCGC TGAACAACCA GGGCCTGTTG
TCGCGGATCG ACTATCTGTC GACGGTGTCG GGCGGCGGTT ATCTCGGCAG CTCGCTGTCG
GCGACGCTGA CCTGCCATAA GGACTTCGTG TTCGGCGGCA GCGCCGCCCC GCTCGCCGGC
GCCGCCCCCG CCACCGACAT CAGCGACACC CCGGCGGTCG GCCATCTGCG CAACTATTCG
AATTATCTGA TCCCGCGCGG CTTTCGCGAC GTGCTGAGCG CCGCGGCGAT CGTGCTGCGC
GGGCTGGTCG CGAACCTGTC CCTGGTGGTG CCGGTGCTGC TGCTGCTGGC GGCGGTCACC
GCGTGGTCGA ACCCGGTGCG GACCTCGCTC GGCAAATCGG ATTTCTTCGG CGTCGACCTC
AGCCAATTTC TGACGCGGAA TTTCGGCGTC ACGCTGGTGG CGGGGCTGAC GCTACTCGGG
CTGTTCCTGC TGTGGGCGCT GGCGCGGTCG TCGCCATGGC TGGCGCGGCG GCTGGGCTGG
ATGGACATTG TCGGCGGGGT CTTGCTGGTG GCGTTCGCGG CGATCGCGTT CTTCGAATTT
CAGCCGTTCG TGATCGAAGG CATGTTCCAG ATCGCCGACC ACAACAACGG CAACCCCAGC
GGGCTGGTGC TGGGACTGTT CACCAGTTGG GTGAAGACGC TGGCCGCCGC CGCGGCGCCG
GTCACCGCTT TGGTGGTGAT GTTCCAGCGT CAGATCGGCG CGTTCCTCAA CAGCGCCACC
GCGGGATCGA GCCTCGCCGC GCAGGCCTCC GCCATTGCGA TCAAGCTCGC GGTCTGGGTC
GCCGGGCTGG CGCTGCCGCT GATCATCTGG GTAGCGTATC TCTATCTGAG CTATTGGGCG
ATCGCCAATG ACGGCAAGCG TACCGCAGAA CAGGTGCGCT GCCCGCCGAC CGCGATCTCC
GCCACCGTAA ACATCCAGCA GCAGGATGGC GCGTCCACCG CGACGCTGCA GGGCAGCCTG
CAACCCGACG ACGCCAGCCG CTGCGCCGCG GCCGCGCCTG CGGATTCGTC GTCGCCGCAG
GCGTGGGCAC ATACGCCAAA CTGGCTGATC TGGCTCTCCA AGTTCATGCC CGGCCGGGTG
CCGGAGGGCC ACCTGATGCC GGCGTTATAT GTCGCGGTGG CGCTGCTGGT GTTCGTGCTG
TCGTGGCCGC TGGCGCCGAA CGCCAACTCG CTGCACCGCC TGTATCGCGA CCGGCTCGGC
AAAGCGTTTC TATTCGATCC GCGCCATCGC CGCGGCGCCC GGCCCAGCGC CAACGAGCCG
AGCCGCGAGC AGGGCCGGGA TTTCGTCAAC GTCAGCGGTA TGCGGCTCAG CACGCTATCG
ACGGCGCAGG CGCCCTATCA CCTGATCAAT GCGGCACTCA ACATCCAGGG CTCGGACTTC
GCCAACCGCC GCGGCCGCAA CGCCGATTTC TTCGTGTTCT CGAAATACTC GACCGGCAGC
CAGGCCACCG GCTACGCGCC CACCGACCGG CTCGAGGCGG CGGCCGCCGA ACTCGATCTC
GCCACCGCGA TGGCGATCTC CGGCGCCGCG GCCTCGGCCA ACATGGGCTC CAAGACCATC
CGGCCGCTGA CGCCGACGCT GGCGCTGCTG AACATCCGGC TGGGCTATTG GCTGACGAAC
CCGGCGTTCT TTGCGGCGGC CGGATCGGGG ACGGCGGCGG GCGCGGACGT AAAATCCAGT
TGGACGCCGA CCCACCGCAC CACGCGCTAT CTGTGGTCGG AGCTTTCCGG CCGGCTCTAC
GAGAACAGCG ACGAAATCTA TCTCACCGAC GGCGGCCATA TCGAAAATCT CGGCATCTAC
GAATTGCTGC GCCGGCAATG CCGGCTGATC ATCGCGGTCG ATGCCGAAGC CGACAGCGCG
ATGCATTTTC CCTCGCTGGT GACGCTGCAG CGCTACGCGC GGATCGATCT CGGGATTCGG
ATCTATCTGC CGTGGGCGCC GATCCAGGCC GCGACGCTGG GCTGCATGGC GGTCAACGCC
GGCAAGCTGC CGCCGCCGCC GCCATCCAAA GAACCGCACG GCCCGCATGT GGCGATCGGC
ATCATCGACT ACGGCGGCGG CGAAAAGGGC ACCCTCGTCT ACATCAAGTC GTCGCTGAGC
GGCGACGAGA ACGATTACGT CCGCGATTAT GCCCGGCGCC ACGCCCAGTT TCCGCACGAG
GCGACCGGCG ACCAGTTCTT CAGCGAGGAG CAGTTCGAGG TCTATCGCGC GCTCGGTTTC
CACATCGCCC ACGGCTTGCT GTGTGGTGCC GACGACGTCA GCGTCGCGAG CGACGGCGGC
GACCCGGTGG TGACGAAATT CAGCGATGCC GGCAACGCGA CCGTCGCGGC GGTGCGGGCC
GCGCTCGGGC TGAGTGTGGA AGAAGAGGGG GAGGGGGCCG GGTCCGGCGT GTAA
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| Protein sequence | MDQTTPNADD DERPWRDKFH AVFAKEIEAI NSRREATRKL ATPASGKTLD AVGLALSGGG
IRSASVCLGV VQALNNQGLL SRIDYLSTVS GGGYLGSSLS ATLTCHKDFV FGGSAAPLAG
AAPATDISDT PAVGHLRNYS NYLIPRGFRD VLSAAAIVLR GLVANLSLVV PVLLLLAAVT
AWSNPVRTSL GKSDFFGVDL SQFLTRNFGV TLVAGLTLLG LFLLWALARS SPWLARRLGW
MDIVGGVLLV AFAAIAFFEF QPFVIEGMFQ IADHNNGNPS GLVLGLFTSW VKTLAAAAAP
VTALVVMFQR QIGAFLNSAT AGSSLAAQAS AIAIKLAVWV AGLALPLIIW VAYLYLSYWA
IANDGKRTAE QVRCPPTAIS ATVNIQQQDG ASTATLQGSL QPDDASRCAA AAPADSSSPQ
AWAHTPNWLI WLSKFMPGRV PEGHLMPALY VAVALLVFVL SWPLAPNANS LHRLYRDRLG
KAFLFDPRHR RGARPSANEP SREQGRDFVN VSGMRLSTLS TAQAPYHLIN AALNIQGSDF
ANRRGRNADF FVFSKYSTGS QATGYAPTDR LEAAAAELDL ATAMAISGAA ASANMGSKTI
RPLTPTLALL NIRLGYWLTN PAFFAAAGSG TAAGADVKSS WTPTHRTTRY LWSELSGRLY
ENSDEIYLTD GGHIENLGIY ELLRRQCRLI IAVDAEADSA MHFPSLVTLQ RYARIDLGIR
IYLPWAPIQA ATLGCMAVNA GKLPPPPPSK EPHGPHVAIG IIDYGGGEKG TLVYIKSSLS
GDENDYVRDY ARRHAQFPHE ATGDQFFSEE QFEVYRALGF HIAHGLLCGA DDVSVASDGG
DPVVTKFSDA GNATVAAVRA ALGLSVEEEG EGAGSGV
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