| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3951 |
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| Symbol | |
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| ID | 3969238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4401862 |
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| End bp | 4403811 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637927055 |
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| Product | AsmA |
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| Protein accession | YP_533796 |
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| Protein GI | 90425426 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.552842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGG CGATGGCCCA AGGATTACGA CGCTTGGGGA TGTCGGTCGC GGCCTTGCTG
GGACTCGCCG CGATCGCGCT GTTGGCGACC TCCGGGCTGC TCGACCGCGA GGCGTTGCGC
GACGCGGTCG AGGCGCAGAT CCGTGCGGTC AGCGGCCTCG AGCTAGCGGT CAACGGCACC
ATCGACGTCT CGGTGTTCCC GGCCAGCCAC GTGTCGTTTC ACGACGTCGA CCTGAAGACC
CCCAATACCG ATGGGCCGGC GCTCCGCGCC GCGGTGCTGA CCGCCAATCT GCGGCTGCTG
CCGCTGCTGC TGCGGCGGTT CGAGATCGCC GACCTCGTGC TGTCGCGCCC GCATATCCGG
GTGATCCGCG CCGCCGACGG CTCCAGCAAT TGGACGCCGT TCGTCGAGAC GCTGACCCAG
ACCATGCAAC CCGGCGCCGA CAATCAGATG TCGTTCTCGG AAATCCGCAT CGAGGACGGC
GAAATCAACT ACCTCGACGA GGCCAACCAT CTCTCCGAGA CCATCGGCAA GATCGACCTG
TCGCTGGCCT GGCCGTCGAT CTCGCGGACC TTCGCCGCCA CCGGGCAGTT CGACTGGCGC
GGCGAACGCA TCGACGGCAG CATCAGCGTC AACGATTTTC TCGCCGCATT GTCCGGCGAA
CGATCCGGCC TGAAGGCGAG GATCGCCGGC GCGCCGATGA AGCTCGCCTT CGACGGCGCG
ATCGCCAATC GCGCCAGCTT GATGCTGGAA GGCACGCTGA GCGCCGACGG CGTCTCGCTG
CGCAATGCGT TGCGCTGGGT CGGCCAGGAG CCGCCCGGCG GCGGCGGCTT CGGGCCGTTC
GCGCTGCGGG CGCGCGCCAG CGTGGTGGGG CCGTCGATGG CGATGACCAA CGTCAATATC
GAACTCGACA AGAACGTCGC CGAAGGCGTC ATCACCTACG TCAACAACGG CCGGCCGTCG
CTGCAGGCGA CGCTGGCCGC CGGCGCGCTC GATTTCACGC CGTATCTGTC GACCATCCGG
CTGCTGGCGA GCGGCGCGCG CGACTGGAAT CGGCAGTTGT TCGATCTCGG CGCGGTCAAC
CCGGTCGATC TGGATATGCG GCTGTCGGCG GCCAAGCTGA CGATCGGCTC CTCGACGCTG
GGACGTACCG CGCTCGGCGC CAATCTGCGC GGCGGCACGC TGGCGCTCAG CGTCGGCGAG
GCGCAGATCT ACGGCGGCGT CGCCAAGGGC TCGTTCGGCA TCTCCCGCGC CGACGCCGTG
GCCGACGTCA AGGCGCAGTT TCAGTTCGTC GACGTCGATC TGATGGCCTG CGCCAGCGAC
CTGTTCGGGG TCCGCAAGCT GTCGGGCCGC GGCAATCTCA CGGTGGCGCT GGAGGCCTCC
GGGTCCAGTC CGTTCGGGCT CGCGCAATCG CTCGACGGCA CCGCCAGCCT GACCGGCCAT
GACGGCGCGA TCTCGGGCTT CAATGTCGAG CAATTGCTGA AACGGCTGGA GCGCCGGCCG
CTGTCCGGCG GCGGCAATTT CCGCAGCGGG CAGACCCCGT TCGACACGCT GAACATCGGC
GTGCACTTCC ATGACGGCGT CGCCACCGCC GAAGACATCC GGATCGAGGG CGCGGCGGCG
CGGATCACGC TGACCGGCAC CGCCTCGGTG CCGGCGCGCG AATTCGACCT CAAGGGCATC
GCCAGCCTGG CTTCGGCGGC CGGCGCGCCG CCCGGCTTCG ACCTGCCGTT CGTGGTGCAG
GGGCCGTGGG ACGACCCGTT GATCTTCCCC GATCCGGAAA GCCTGATCCG CCGCTCGCCG
GCCTCGGCGC CGCTGCTCGA CGCGGTCAAG GACCGCAAGA CCCGCGACGC GGTGCGCTCG
GTGCTGGAAC GCTTCACCGC CGGCCAGAAG AAGGCCGAGC CGGACGCCGC GGTGGCGCCA
CCAGCCGCCG CCGAGTCGAA GTCGAACTGA
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| Protein sequence | MSLAMAQGLR RLGMSVAALL GLAAIALLAT SGLLDREALR DAVEAQIRAV SGLELAVNGT
IDVSVFPASH VSFHDVDLKT PNTDGPALRA AVLTANLRLL PLLLRRFEIA DLVLSRPHIR
VIRAADGSSN WTPFVETLTQ TMQPGADNQM SFSEIRIEDG EINYLDEANH LSETIGKIDL
SLAWPSISRT FAATGQFDWR GERIDGSISV NDFLAALSGE RSGLKARIAG APMKLAFDGA
IANRASLMLE GTLSADGVSL RNALRWVGQE PPGGGGFGPF ALRARASVVG PSMAMTNVNI
ELDKNVAEGV ITYVNNGRPS LQATLAAGAL DFTPYLSTIR LLASGARDWN RQLFDLGAVN
PVDLDMRLSA AKLTIGSSTL GRTALGANLR GGTLALSVGE AQIYGGVAKG SFGISRADAV
ADVKAQFQFV DVDLMACASD LFGVRKLSGR GNLTVALEAS GSSPFGLAQS LDGTASLTGH
DGAISGFNVE QLLKRLERRP LSGGGNFRSG QTPFDTLNIG VHFHDGVATA EDIRIEGAAA
RITLTGTASV PAREFDLKGI ASLASAAGAP PGFDLPFVVQ GPWDDPLIFP DPESLIRRSP
ASAPLLDAVK DRKTRDAVRS VLERFTAGQK KAEPDAAVAP PAAAESKSN
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