| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3950 |
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| Symbol | |
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| ID | 3969237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4400758 |
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| End bp | 4401495 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927054 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_533795 |
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| Protein GI | 90425425 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGG TCTACCCCGA CGCCCAAACG GCCCTCGACG GCCTTCTCAA AGACGGCATC
ATGATCATGT CCGGCGGCTT CGGGCTGTGC GGCATCGCCG AATGGCTGTC CGACGCGATC
CGCGAGTCCG GCGTGAAGAA CCTCACCGTG GTCTCCAACA ATGCCGGGGT CGACGGCATC
GGGCTGAGCC GGCTGTTGGA AACCCGGCAG ATCAAAAAGA TGATCTCGTC CTATGTCGGC
GAGAACAAAT TGTTCGCCCA GCAGTTTCTC GCCGGCGAAT TGGAACTGGA ATTCGCCCCG
CAGGGCACTT TGGCCGAACG GATCCGCGCC GGCGGCGCCG GGATTCCGGC GTTCTACACC
AAGACCGGGG TCGGCACGCT GATCGCCGAG GGCAAGGAAG AGAAGGTGTT CGACGGCGAG
AAATACATCA TGGAGCGCGG GCTGTTCGGC GATCTCGCCA TCGTCCATGC CTGGAAGGGC
GATACCGCGG GCAATCTGGT GTACCGCAAG ACCGCGCGCA ATTTTAACCC GATGATGGCC
ACCGCGGCGA AGACCACCGT CGCCGAGGTC GAGCACCTGG TGCCGGAAGG CGAGATCGAT
CCCGACCACA TCCACACCCC CGGGATTTTC GTGCAGCGCA TCGTCGAGGT CGGCAGCGCC
AAGAAACACA TCGAGCAGCG CACCACCCGC AAGCGTACCG ACCCGGCGAT CCCCGCTGGA
ACCGGAGAGG AAGTCTGA
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| Protein sequence | MNKVYPDAQT ALDGLLKDGI MIMSGGFGLC GIAEWLSDAI RESGVKNLTV VSNNAGVDGI
GLSRLLETRQ IKKMISSYVG ENKLFAQQFL AGELELEFAP QGTLAERIRA GGAGIPAFYT
KTGVGTLIAE GKEEKVFDGE KYIMERGLFG DLAIVHAWKG DTAGNLVYRK TARNFNPMMA
TAAKTTVAEV EHLVPEGEID PDHIHTPGIF VQRIVEVGSA KKHIEQRTTR KRTDPAIPAG
TGEEV
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