| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3926 |
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| Symbol | |
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| ID | 3969192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4357953 |
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| End bp | 4361525 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637927029 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_533771 |
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| Protein GI | 90425401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCGA CTCACGCAAA GCGCCAGCCG GATACCCTCG CGGAGCGCTT TGCGCTCGAG
GAAACATTTC TATCCTCTCC CAATACGGCC GCGCTGAAAT CTGCCGTGAT CCGCGCCATC
GATCGCCGGA CTGGCGACCC GGTGGTTCTC AAATACTGGG AGAAAACCGG AACTGCGGTC
GATACGGACT TTCGAGAACT GTGGCGGCAT GAAATGCGCC AGAGCGAGCG CGTGCGTGCC
TACCCTCGCG CGGATGAAGT CGTCGTGGAG GTCCTCGCTT CGGGGGAAAG TGACGATGCA
TTCTACATCG TCATGCCGAG TGACGTCGCT CCACTGGAAC ATGCTTCGCG GTTCGTGCGT
CCCGACCACT GGCTGCGCGC GCTGCAGGGA CCTCGGCAAC GCGCCTTGCT CTGGAAGAAT
TTGCGTCGTC TGGCGGAATC CCTCGGGGCA GTTCACGGTC AAGGGTTGGT TCATGGCCGG
ATCGATGGTC GCGCCGTCTA TTCCACTGGG GCCGCGACCA CGCCTGACTT CCGTTTGGGC
GGGTTCGAGT TTTGCCTGCG GGTCGCAGAA CTCAACAAGG CTCCCCTGCA TGTGATCGCA
AAAAGCCGTC CGGTCGGCTC GGTCATCTTT TCCTTTCTCG ACGATTGGCG CGCGCTCGGC
CAGGTAGGGG CCGACCTCAT TGGCCTTGAC GCAGACAAGC TTGAGGAAGA GGAGATTCAA
TTCATTGAAG GGCGCGCGAA AATCGATTTG CGGGCTTCGG AGATCGACCT GATCAGGCTG
CTGTTCGAAC CGGAGCGCAA TCGTATCCTC GATGCCGCAA CGGTCACCAG TCGGATCGAT
GCCATTCTCA ACGAACTGGA TGCCGAAGCA TTTGCCGACA ATGGCCGGTA TGTATTGGCG
CTTCGGCTCG GACCAACTAG TCAGCTTTCT GCCACGCTGT GTGCAGCCTC TGGCGACACC
TTCGACAATG ACGATTCCGG CAGCCAAGTC GAGTTTATTC GCGCGGATCT GGAGACTGGC
GCAAGTCTCA CCCGTACCGC GAGAGGCGAT CTTCTGCTGA TGACGGAAAG TCTGGTGTAT
GACCTTCAGC CTCTTCGTGT CGCCGGGGCT GACGAGACCT GGAATGTCGC CTCCTGCAAC
AACGCTCGTT TCAGGGATGA CGTCCGCCTG GGGCGACGGG AAACAATCGC CCTTCCCGCG
CACCGAATCG AGATCGTCCG GTTTGCGGCT GCGTCGCGCC GCCTGAATGA ATTGCGCTCC
GATGCACTGG ACTGGAGCGC GGCCTTCGAC ATGACACCCG ATGGCGACCC GACGCTTGTC
GTACGGCGCG GTCTGCTCCT TGCCCAGATC GCGGAGGCGC TTTTCAAGGG GGCCGAGATC
GCGCCTGTGG AACTTGTCAA TCAACGGCGT CAAGGAGACA AACGTATCGT TGAAATCGCG
GCAAGCGATT CGGAGCATCG AACACGACTT TCGCAGGCGC TTGGCGTGGG CGAACCGCAC
CAACTGATGC GGAGACTTTT CGACCGCGAA GAGGCCGACG TCGATGCGGA ATGGCAGCTC
ACCGAAGCCG CCGGCCTCGG CATGACGGTT CGGAGCGCCG CCGGCGTACG TTTCATTCGC
CCGGTCCAGA AGAACCATCG GCGGCTTTAC GAATTCGAGA TCCTGGACGG CGTCGTCCCG
CCGCATTCGC AACTTCATCT GCGCAAGGTC GACGAAACAG GAACGGAGCA GGTCCTTCGG
CGGCGGCTCC GCATGCTGAC AACGTTGTCG ACCCAGTCCG AACTCGCCCG CATGCTGGCC
GATCCGCGGG AACGGTTGCG CACCTATCAG GACGACCCGC TTGTTGAGGA CGATCATTTC
GGCAAACTTG ACGAGTCCAA GCAGGAGGCG TTGCGCTCGA TCTGGTCGAC CGGTCCCGGC
CAGTTCGTTG TCGGTCCGCC CGGTGTCGGC AAGACCAGGC TGGTCACCGA GGTCGTGCGC
AGAGCCCTGG CGGGTGACCC GACGATCCGG CTTCTCTTGA GCGCGCAGGC ACATCAAGCC
CTGGATCATC TCGCCGCATC CGTCCAGAAG ATGCTCAAGA AAACGGGGCT AGATAACGAC
GTCATTCTGG TCCGGTCCAA GGCAGACAAC GGCGCCGATC TTTCCGGCGC TCAGACGCCG
GATCGAGCGA AGGCTTATCT CCAGGAACTC AAGCAGAGTT CGCTCTATCG CCGGGCGCCG
CGCGCCATAC AACAGACATT GCGCGACATG ACGACCGCGG CGGGCGTGAC CGGAAATTTG
CGCGCAAGGC TTTCCCTGAC GACGCTGCGC CAACGGCGTT CGTTCGAAGC GCTTGTTCTG
CAATCCGCCA ATGTCTTGTT CTCGACGACC AACTCCGGCG ACCTTGCCCG GCTGATCGAT
GACGGCGCGC TGTTTGACTG GACGATCATA GAAGAAGCCG CGAAAGCAAC GGGATCGGAA
CTTCTTGCGC CGCAGCTGCT GTCGATGCGG CGGATGCTAA TTGGGGATCA CAACCAGTTG
CCGCCGTTCG ACACGGACCG CATCGCAGAA TTTCTGCAAG ACCAGACGCG GGTCAAGAGT
GCATTGGCCG AAAGCGATCT ACTCATCGGC AATATCTTCC GAGACTTTGG ACTGGATGAT
CTCAAAGAGG CAATTGAAGA CGACGGGGTC TTAAGCGAGA CCTGCGCGTC GGCGCGCCGC
ATGCTGTTGT TATTCGAGAG TCTGGTTACC GGCGAACTCG ACCGGCAGAA ACGATCCGAC
CAACGCCGCC GTCGTGTGGC AACCGAACTC CTGCAGCAAC ACCGGATGCA CCCCGCGATC
GCCACCGTGA TTTCGGAGTG CTTCTATGAC GGAACGCTCG AGACACCGAA AGAGCGCGAG
ACAGAATTCC ATAGCGAACA ACCGCCGTTC ACGATCACGG ACGAGAGACT GCCAGCTTCA
CCGATCGTCT TCATTGATCT GCCCTATGTG CAGCGGGAGG GCAGCGCTGG CGAGCAACGT
CCTACCTATC ACAATCCTGC GGAATTGCAG GCTGCGCTGT CCGTTCTCGG AATGTTGAAA
CCTGCCCCGA AAAAACCGGA GGAGCCCTCA ACGCTTGCTG TCCTGTCTCC CTACAATGAA
CAGGTCGGCC GTTTGGGTCG CGCGATCGAA GACGCGCTGC AGGGCAAGCT CGTCAATATC
GTGGATTTCA AGCCCGGGAC TAATGCGTCG GGATTTGAGA GCACGGTCGA CTCGTTCCAA
GGCAGTGAGG CTGACGTCGT CGTTGTTTCG TTGGTACGAA ATAATGACCA TGTTGGACGA
AGGGCGCTCG GCATCTTGCG CGATCGACGG CGCATGAACG TGCTGTTGAG CCGAGCCAAA
TGGAAGCTCA TCATCATCGG CAGCATGGAA TTCCTGCGCG TTCAGGGACG GCGATACCGA
CGCCACAGCA CAGATAATCG CAGCGTACCA GCATTCCTCG CGAAAATGTC GGAGGTGTTC
GACCAGTTGG CGAAAGAAAC GCTCCCTGAC GGTAAGACGC CGAAATTCAA GCTGGTGACG
GCGGCTTCGC TCATGACGGT TGCAAAATCA TGA
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| Protein sequence | MPPTHAKRQP DTLAERFALE ETFLSSPNTA ALKSAVIRAI DRRTGDPVVL KYWEKTGTAV
DTDFRELWRH EMRQSERVRA YPRADEVVVE VLASGESDDA FYIVMPSDVA PLEHASRFVR
PDHWLRALQG PRQRALLWKN LRRLAESLGA VHGQGLVHGR IDGRAVYSTG AATTPDFRLG
GFEFCLRVAE LNKAPLHVIA KSRPVGSVIF SFLDDWRALG QVGADLIGLD ADKLEEEEIQ
FIEGRAKIDL RASEIDLIRL LFEPERNRIL DAATVTSRID AILNELDAEA FADNGRYVLA
LRLGPTSQLS ATLCAASGDT FDNDDSGSQV EFIRADLETG ASLTRTARGD LLLMTESLVY
DLQPLRVAGA DETWNVASCN NARFRDDVRL GRRETIALPA HRIEIVRFAA ASRRLNELRS
DALDWSAAFD MTPDGDPTLV VRRGLLLAQI AEALFKGAEI APVELVNQRR QGDKRIVEIA
ASDSEHRTRL SQALGVGEPH QLMRRLFDRE EADVDAEWQL TEAAGLGMTV RSAAGVRFIR
PVQKNHRRLY EFEILDGVVP PHSQLHLRKV DETGTEQVLR RRLRMLTTLS TQSELARMLA
DPRERLRTYQ DDPLVEDDHF GKLDESKQEA LRSIWSTGPG QFVVGPPGVG KTRLVTEVVR
RALAGDPTIR LLLSAQAHQA LDHLAASVQK MLKKTGLDND VILVRSKADN GADLSGAQTP
DRAKAYLQEL KQSSLYRRAP RAIQQTLRDM TTAAGVTGNL RARLSLTTLR QRRSFEALVL
QSANVLFSTT NSGDLARLID DGALFDWTII EEAAKATGSE LLAPQLLSMR RMLIGDHNQL
PPFDTDRIAE FLQDQTRVKS ALAESDLLIG NIFRDFGLDD LKEAIEDDGV LSETCASARR
MLLLFESLVT GELDRQKRSD QRRRRVATEL LQQHRMHPAI ATVISECFYD GTLETPKERE
TEFHSEQPPF TITDERLPAS PIVFIDLPYV QREGSAGEQR PTYHNPAELQ AALSVLGMLK
PAPKKPEEPS TLAVLSPYNE QVGRLGRAIE DALQGKLVNI VDFKPGTNAS GFESTVDSFQ
GSEADVVVVS LVRNNDHVGR RALGILRDRR RMNVLLSRAK WKLIIIGSME FLRVQGRRYR
RHSTDNRSVP AFLAKMSEVF DQLAKETLPD GKTPKFKLVT AASLMTVAKS
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