| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3919 |
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| Symbol | |
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| ID | 3969185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4347217 |
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| End bp | 4351596 |
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| Gene Length | 4380 bp |
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| Protein Length | 1459 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927022 |
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| Product | methylase/helicase |
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| Protein accession | YP_533764 |
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| Protein GI | 90425394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAT CTTCTTCCTC CACGGTCCTG GCCGCGACCG TACGATCTTC CACGTCGCTA
GACAGTGGCG ATGCCGCCGT CCGAATCATT GCCGCTGCAC GCTTGATCCT TCCGCAACTC
AAGCGTGGCC ACCGCATTGA CGCCGCGGGC CTGCGCGTCG CGATGGAGAC GGCCTATTCC
GGTTCTGACG CCGACGGCGC TTGGGACTGG AAGTCTGCCT ACGACGCTTG CGAAGCGGCG
ACCGTCCTGT TCCTGCGCAA ATTCGGTCCG GCGATGCGGA TGCGCGCCGC ATCACCCGAT
GCCATGCTGC CGATGCTGGT GAAAATTGCG GGCCTCCTTC CCACCCACAC GCGACGGTCC
GAAGAGAGCG AGGCGCTTCA GCAATTCAGT ACACCGATCG CTCTCGGACT TGCGGCTTCC
GCCGCGGCGG CAATCACCAC CTCGGACATC GTCCTGGAGC CATCGGCCGG AACTGGGCTG
CTCGCTATTC TTGCCGAATT GTCCGGCGCT GCCCTCGTTT TGAACGAGTT GGCCGAGACC
CGTGCCGGCT TGCTCGCGCT GCTTTTCCCA GAACTCGCCG TGACCCGCTT CGACGCCGCG
CAGATCGACG ATCACCTCCA TGCCGGGATC ACGCCGAGCG TTGTGCTAAT GAACTCGCCA
TTTTCCGCCG TGGCCAATGT GGATCGCCGC ATGAGCGATG CAGCGTTGCG TCATATCTCG
TCTGCACTGG TGCGGCTGGC GGCTGGCGGC CGCCTGGTTG CCATCACCGG TGCCAATTGC
GGGCCCGACA ATCCGACATG GCGTGACGCC TTTATCAGCC TGCAGCAGCA TGGGCAGGTG
GTGTTTTCCG CGCCGATCGA CGGCGCGGTC TATGCCCGGC ATGGCACAAC CATGGACACC
CGGTTGACCG TGATCGACAA ACGGGCCGCC GAGGATCCCC GCGCATTTCC GGAGTCTCCG
GGCGTAGCGC CAGATGTAGC CACGCTGCTC GGCTGGATCG CGCAATCCGT GCCGCCACGG
CCGCCCCTTG CGCTGACGCC GACAACTTCC TCGATCGTCC GATCGGTGCC GAGTATTGAT
CGCGCGCGGA AGCCGGTCGT CGCCAGGCCC TTCTCTCTCC CCGCCAAACC TCACGAACCG
GAGGGGATCG AACTCGCCTA TCAAACCGTC GACTGGAAGC CGGTCGAGGG CGGCGGTATC
ACCGATGCGC TGTATGAAGC CTACAGCTTG CAGTCGATCC GAATTGCCGG CGCGCAGGCT
CATCCGACCA GGCTGGTGCA ATCGGCGGCG ATGGCCTCGG TGGCGCCGCC GAAGCCGAGC
TATCGTCCGC ATCTTCCTGC TGATGTCATC GAACGCGGCG TCTTGTCGGA TGCCCAGCTG
GAGACGGTGG TCTATGCCGG CGAAGCCAAT TCACAGTTCC TCGCAGGATC CTGGAGCGTT
GACGAGACTT TCGACATTGT CGCGGCCGCG CGCGACGACG CCGAGACCGC GGTGCGGTTT
CGCCTGGGCT TCATGCTTGG CGACGGCACC GGCGCCGGCA AGGGCCGGCA GGTCGCGGGT
ATCCTGCTCG ACAATTGGCT GAAAGGGCGC CGCAAGGCGG TCTGGATCAG CAAGTCCGAC
AAGCTGATCG AGGATGCCCA GCGTGATTGG TCGGCGCTCG GACAGGAACG GCTGCTGGTG
ACACCGCTGT CGCGCTTTCG CCAGGGCACC CCGATCCGTC TCGCGCAAGG CATCCTTTTT
ACGACCTACG CCACGCTGCG CTCCGACGCT CGTGACGACA AGATATCGCG GGTGAAACAG
ATCGTGGAAT GGTTGGGCGC CGACGCAGGC TCTGAGGCCG GGGCGGGTTT CGACGGCGTG
ATCATTTTTG ACGAGTCTCA CGCGATGCAG AATGCTGCGG GCGGCAAAGG CGAACGCGGC
GATCAGGCCG CCTCGCAGCA GGGCCGCGCC GGTCTCCGAT TGCAACATGC GGTGCCCAAT
GCGCGCATCG TTTACGTCTC GGCGACCGGT GCCACCACGG TTCATAACCT CGCCTATGCG
CAGCGCCTCG GGCTCTGGGG CGGCGACGAC TTTCCTTTCG CCACCCGCGC GGAATTCGTC
GAGGCGATCG AGGCCGGCGG TGTCGCGGCG ATGGAAGTGC TGGCCCGCGA TCTGAAGGCG
CTCGGGCTCT ATGCGGCGCG GTCGCTGTCC TATGAGGGAG TGGAATACCA ACTGGTCGAG
CACCGGCTCA CCGAGGAGCA GATCCGCATC TATGACGCCT ATGCGAGCGG CTTCAGCATC
ATCCACAACA ACCTCGATGC CGCGCTACGG GCGGCCAACG TCACCGGCAC CACCGGCACG
CTGAACGCGC AGGCCAAGTC CGCCGCGAGA TCCGCATTCG AATCCGCCAA GCAGCGGTTC
TTTAATCACT TGATCACCGC GATGAAGGTG CCGTCGCTGA TCGCGTCGGT CGAACGGGAT
CTGAGCGACG GCCACGCCGC CGTGATTCAG ATCGTCTCGA CCGGTGAGGC GCTGATGGAG
CGCCGGCTTG CGGAAATTCC CACCGAGGAA TGGGGCGATG TTCAGGTCGA CATCACGCCG
CGAGAATATG TGCTCGATTA TCTGGCTCAT TCATTCCCGA CCCAACTCTA CGAGCCGTTC
ACCGACAGCG AAGGCAATCT GTCGTCTCGG CCGGTGTTTC GGGATGGCCA ACCGGTGCAA
TGCCGGGACG CGGTCGCGCG GCGAGACCGA TTGATCGAAC ATCTGGCCTC GCTGCCGGGT
GTGCATGGTG CACTCGATCA GATCGTGCAG CGCTTTGGCA CCGACACGGT TGCGGAGGTG
ACAGGACGTT CCCGGCGCAT CATCCGCAAG ACCAACGCCG ATGGTACAGG TCGCCTTGCC
GTGGAGAACC GCGCCGGCTC CGCCAATCTC GGCGAGGCGC AGGCGTTCAT GGATGATCTC
AAACGCATCC TGGTGTTCTC GGAAGCTGGC GGTACCGGGC GCTCCTATCA TGCGGAGCTG
TCGGCCAGTA ACCGGCGCCT GCGGGTGCAT TATCTGTTGG AAGCCGGATG GAAGGCCGAT
GCGGCGATCC AGGGGCTCGG CCGCACCAAT CGTACCAATC AGGCGCAGCC GCCGCTGTTC
CGGCCGATCG CCACCAATGT GAAAGCGGAG AAGCGCTTTC TCTCGACCAT TGCGCGGCGG
CTCGACACGC TGGGCGCCAT CACCAAGGGC CAGCGCCAGA CCGGCGGGCA GGGCCTGTTC
CGCGCCGAGG ACAATCTTGA AAGCCATTAT GCCCGCGACG CCCTGCGGCA ACTGTATCTG
CTGCTGGTCA ATGGCAAGAT TGCGGATTGT TCGCTGCAAG CGTTCGAGGA CGCCACCGGG
CTGAAGCTGA CTGATAGCAA CGGGATCAAG GACGATCTGC CGCCGATCAC CACCTTCCTG
AATCGGCTGT TGGCGCTGAC AATCGATCTG CAGAACATTC TGTTTGCCGC GTTCGAGCAA
TTGCTGACCG CGCGCGTCGA GGGCGCGATC GCCTCCGGCA GCTATGACGT CGGCCTGGAA
ACTCTGACCG CCGAGAGTTT TGCCGTCACC GGCCGGCAGA CGATCTACCC CCATCCCGGC
ACCTCGACTG AGACCAGTCT GCTGACGATC ACCCAGCGCG AGCGTAACCG GCCGGTCACG
CTCGACGAGG CATTGGAGCG CCTCTCCGAT CCGCGCGCGC GTCTTCTGGT CAACAGCCAA
TCGGGGCGTG CCGCGGTGCA GGTTCCGGCA CGTAGCATCA TGCTGGACGA CGGCGAGGTG
GAACGCCTGG TCCGGCTGAT CCGGCCGATC GAGCATCCGA CGTTGCCGCT GGCTTTGATG
CCGCAGACCC ATTGGCAGGA AGCCGATCGG GAATTCTTTG CGCGCGCCTG GGAAGCAGAA
GTGGCTGATG TGCCGGAATT TACCTGCAGC GAGATCCACA TCGTTGCCGG GCTGCTGTTG
CCGATCTGGA AGCGGTTGCC GAACGAGTCG ACGCGTGTCT ACCGGCTCCA GACCGACACC
GGCCAACGCA TCATCGGCCG CAAGGTGTCA CCCGCCTGGG CGGCGACCGC GACCGATGTG
GGTCTATCGA CCATCACCCC CGATGCTGCG TTTGCGGCAC TGCTCGATGG CAAGACGATC
ATTGATCTCG CTGAATCTTT GCAGCTTCGG CGTGTCCGCG TGATGGGTGC AAACCGGATC
GAGCTGAACG GCTTCTCCGA GGCGATGCGC GACCGGCTGC GCGCCTACGG CCTGTTCAGC
GAGATCATTT CCTGGAAGCT GCGCTTCTTC GTGCCGGTCG ACGCGACCGG CCCGGCGGTG
CTGGCCAAAG TGCTGGAGCA CTATCCGGTG CTCCGGGTCG CCGATCGGAC GGCGGCGTGA
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| Protein sequence | MTPSSSSTVL AATVRSSTSL DSGDAAVRII AAARLILPQL KRGHRIDAAG LRVAMETAYS
GSDADGAWDW KSAYDACEAA TVLFLRKFGP AMRMRAASPD AMLPMLVKIA GLLPTHTRRS
EESEALQQFS TPIALGLAAS AAAAITTSDI VLEPSAGTGL LAILAELSGA ALVLNELAET
RAGLLALLFP ELAVTRFDAA QIDDHLHAGI TPSVVLMNSP FSAVANVDRR MSDAALRHIS
SALVRLAAGG RLVAITGANC GPDNPTWRDA FISLQQHGQV VFSAPIDGAV YARHGTTMDT
RLTVIDKRAA EDPRAFPESP GVAPDVATLL GWIAQSVPPR PPLALTPTTS SIVRSVPSID
RARKPVVARP FSLPAKPHEP EGIELAYQTV DWKPVEGGGI TDALYEAYSL QSIRIAGAQA
HPTRLVQSAA MASVAPPKPS YRPHLPADVI ERGVLSDAQL ETVVYAGEAN SQFLAGSWSV
DETFDIVAAA RDDAETAVRF RLGFMLGDGT GAGKGRQVAG ILLDNWLKGR RKAVWISKSD
KLIEDAQRDW SALGQERLLV TPLSRFRQGT PIRLAQGILF TTYATLRSDA RDDKISRVKQ
IVEWLGADAG SEAGAGFDGV IIFDESHAMQ NAAGGKGERG DQAASQQGRA GLRLQHAVPN
ARIVYVSATG ATTVHNLAYA QRLGLWGGDD FPFATRAEFV EAIEAGGVAA MEVLARDLKA
LGLYAARSLS YEGVEYQLVE HRLTEEQIRI YDAYASGFSI IHNNLDAALR AANVTGTTGT
LNAQAKSAAR SAFESAKQRF FNHLITAMKV PSLIASVERD LSDGHAAVIQ IVSTGEALME
RRLAEIPTEE WGDVQVDITP REYVLDYLAH SFPTQLYEPF TDSEGNLSSR PVFRDGQPVQ
CRDAVARRDR LIEHLASLPG VHGALDQIVQ RFGTDTVAEV TGRSRRIIRK TNADGTGRLA
VENRAGSANL GEAQAFMDDL KRILVFSEAG GTGRSYHAEL SASNRRLRVH YLLEAGWKAD
AAIQGLGRTN RTNQAQPPLF RPIATNVKAE KRFLSTIARR LDTLGAITKG QRQTGGQGLF
RAEDNLESHY ARDALRQLYL LLVNGKIADC SLQAFEDATG LKLTDSNGIK DDLPPITTFL
NRLLALTIDL QNILFAAFEQ LLTARVEGAI ASGSYDVGLE TLTAESFAVT GRQTIYPHPG
TSTETSLLTI TQRERNRPVT LDEALERLSD PRARLLVNSQ SGRAAVQVPA RSIMLDDGEV
ERLVRLIRPI EHPTLPLALM PQTHWQEADR EFFARAWEAE VADVPEFTCS EIHIVAGLLL
PIWKRLPNES TRVYRLQTDT GQRIIGRKVS PAWAATATDV GLSTITPDAA FAALLDGKTI
IDLAESLQLR RVRVMGANRI ELNGFSEAMR DRLRAYGLFS EIISWKLRFF VPVDATGPAV
LAKVLEHYPV LRVADRTAA
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