| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3906 |
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| Symbol | |
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| ID | 3969269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4337536 |
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| End bp | 4338051 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637927009 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_533751 |
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| Protein GI | 90425381 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGCCC GGAAAGTGAC ATTTCTCACG ACGCTATCGG CTGCAGCGAT CCTGTTGGTT
TCAATGGGCG AACAAACACC GAAGCTTTTC ATCTGGAACG CCTCCGAGAG CGTGCCCGTC
GGGCTCTACC GGCTGCGGCC GATCCGCAAA CTTGCCGTCA CCGAATTGGT CGCGGTCCAG
CCGCCAGAGC CGCTTGCCAA ATTCCTGAGC GAGGGCGGTT ATCTACCCCG CGGCATTCCG
ATGCTGAAGC GCGTGTTGGC GCTACCCGGA CAGACGGTTT GCCGGAATCA TCTCCTTATT
TCGGTTGACG ATATCGCGCT GGGTGAGGCG CTGGAGCGCG ACCGCAGAGA CCGATCGCTG
CCGGTCTGGC AGGGCTGCCA TGTGGTTGCC GAGGGCGAAG TCTTCCTCAT GAACTTGCAG
TCCGCCGACT CGCTCGACGG CCGATATTTC GGCGTGACGC CGGCGACTGC GATCCTCGGA
CGAGCAGAGC CTCTCTGGAC CAAAGAGGAG GAGTGA
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| Protein sequence | MKARKVTFLT TLSAAAILLV SMGEQTPKLF IWNASESVPV GLYRLRPIRK LAVTELVAVQ
PPEPLAKFLS EGGYLPRGIP MLKRVLALPG QTVCRNHLLI SVDDIALGEA LERDRRDRSL
PVWQGCHVVA EGEVFLMNLQ SADSLDGRYF GVTPATAILG RAEPLWTKEE E
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