| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3900 |
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| Symbol | |
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| ID | 3969263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4330628 |
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| End bp | 4330957 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637927003 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_533745 |
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| Protein GI | 90425375 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.394527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGT CGCTTCAGCA TATTCGTCGC CACGCCGTCA CCGCAGTCAC TACCGCCCCT
TTTGCGCTCA TCTCAGGTTC GGTTTGGGCT GCCGGCTCGA ACATGCCTTG GGAACAGCCG
CTCAGTCAGA TCCTGCAATC GGTGGAAGGG CCGGTCGCCA AAATCCTCGC GGTGATCATC
ATCATCGTCA CTGGCTTGAC GCTGGCGTTC GGCGATACCT CGGGTGGTTT CCGCAGGCTG
ATCCAGATCG TGTTCGGCCT GTCGATCGCG TTCGCGGCGA GCTCCTTCTT CCTGTCGTTC
TTCTCGTTCG GCGGCGGCGT GGTGGTGTGA
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| Protein sequence | MNPSLQHIRR HAVTAVTTAP FALISGSVWA AGSNMPWEQP LSQILQSVEG PVAKILAVII
IIVTGLTLAF GDTSGGFRRL IQIVFGLSIA FAASSFFLSF FSFGGGVVV
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