| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3878 |
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| Symbol | |
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| ID | 3969377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4310887 |
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| End bp | 4311915 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637926984 |
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| Product | transketolase, central region |
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| Protein accession | YP_533726 |
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| Protein GI | 90425356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.733485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGT TATCGATTGA CGATGCGCTT GCCGGCGCGA CGACGGCAAA GGCGTTGCGT
GCCGCCTATG GCGAAACGCT GATCGAAATG GCCGAAGAAG GTGCCGATTT TCTGGTTCTC
GATGCCGATC TTTCCCGATC GACTACGACC GATCAATTCC AGCGTCGGTT TCCAGACAGG
TTCTTCAACC TCGGTATCGC GGAGCAGAAT ATGATTGGGC ATGCGGCCGG GCTGGCGATC
AGCGGCCTGA GACCGTTTGC GACGACTTAT GCGATCTTCA TTGGTCGCGC ATTCGATCAG
ATCCGGCAGT CCGTATCTTT CGCTAATCTC GACGTGAAAA TCGTGGCTAC GCATGGCGGG
CTCGCCGCCT CCTTCGACGG GGGCTCGCAT CAGGGCATTG AGGATATCGC CATGATGCGG
TTGCTTCCCA ATATGACTGT TCTCAATCCG TTCGATTTCA ATCAAGCCAA GGGCGCAATT
CGGGCCGCTT ACGCCATGCT CGGACCGGTC TATCTGCGTC TGCAAAAGGA GCCCACGCCG
GTATTCATGC CCGCAGATCA GTCATTTGAT ATTGGTGCCG TCTCGCAATG GGGCGACGGC
AAAGAACTGG CATTCATCGC GACCGGTTAT GTCACTTATG AATGCTTGGA GGCGGCTGCC
CAGTTGCGCA AATGCGGTAT CGAAACCCGG GTCATTGGCC TGGCCACGCT TAAGCCGTTT
CCAACAACCG CGTTATGCTC GGCGATAGGC GGTTGTCACC AACTGATTAC GGTCGAGGAG
AGTCTGAGTT CGGGCGGATT GCGCGACGCG GTGGCTGTCG CAATGTCGGC GACCGGTGCG
GCAATCACCT GCGTCGCGAT GCAGGATCGA TTTGGCGAGA CCGGACCCTG GCGCGATCTT
CTCGATAAGT TCGGGTTCAC AGCGCGCCGC CTATGCGAGA CCGCCAAAAC GGTCCTTGAT
GTTGCAGTTC AGGTGCACGG GGAGGCCGAC GCGGGCGTGC CCGCGTCGAA CTGTTCGACC
GGGAGATAA
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| Protein sequence | MITLSIDDAL AGATTAKALR AAYGETLIEM AEEGADFLVL DADLSRSTTT DQFQRRFPDR
FFNLGIAEQN MIGHAAGLAI SGLRPFATTY AIFIGRAFDQ IRQSVSFANL DVKIVATHGG
LAASFDGGSH QGIEDIAMMR LLPNMTVLNP FDFNQAKGAI RAAYAMLGPV YLRLQKEPTP
VFMPADQSFD IGAVSQWGDG KELAFIATGY VTYECLEAAA QLRKCGIETR VIGLATLKPF
PTTALCSAIG GCHQLITVEE SLSSGGLRDA VAVAMSATGA AITCVAMQDR FGETGPWRDL
LDKFGFTARR LCETAKTVLD VAVQVHGEAD AGVPASNCST GR
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