Gene RPC_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3877 
Symbol 
ID3969376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4309684 
End bp4310832 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID637926983 
Producthypothetical protein 
Protein accessionYP_533725 
Protein GI90425355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCGGT TCGGAGGGGT CGCTATCCGG GTCAGCGCTG CGCACTCGTC CTTGGTGTTA 
TGGTCGTTCC TCGATATGTA CTTTTCACCA TATTTCGAGA TGGTCGATTC CACAGGCGAT
GCCTTGCTCG CCCTCGACGT CGAAGTCGTT ATCGGGGCAT GCGAGTCCAG AATCGACGCT
CGCCAATGCA GCGAGGTCGA AGTCGATCGA TCCGGTGGAT TTCTTCGTTG CAAGGGCTTC
TGGATCGATC GCGGTTCAAC ACGAATGGTT CACTTGGATC CGTTTGCCGT GGATGTTTGC
ATCGATCGCG AACGGAGGCG TGCAGTTGTA ACCGGCCAAG ATGAACTGAC ATTGCGCGTG
CCGCTGCTAC GAATCATCGA AGATGCGTGC GTCGCTGCAC TCGAATCGCG CGGTGCTGTT
TTCATCCACG CAAGCGCAGT GGCCGTCGGC GCCAAGGCTA TTCTGCTCGT TGGCAACAAA
GGGTCTGGGA AAACCACCTC GCTCTGCCGC TTGTTGAAGC TGTTTGACGT GAGTAAGCTC
GCCAACGACA ATGTCGTGCT GTGGCTAGAG GATGCTTCAG TCATCGTGCG GGGTTGGCCG
AGCTTCTTTA AAGTCGCCGC TGCCACCGTA GCGACCCAGG AGGAACTCAC ACACCTGTTC
CCGTCGGCGT TGCGCCATCT ATTGGACCAC GGCGACCAGT TGTGGAAGGT CTACGAAAAG
ATTGCCATAT ACCCGACCGA AGCCGCGGAA CTATTTGATC GACAGATCCA GCCACAGGCC
GTTATTTCAA CGATCATCTT GCCGCGCTTC GGCAAGGATC TCGTGCCCCG ATTAACCACG
ATCAGCCGGG ACGAGCTTTG CGACGAGATC GGCCTCTATA TCCAGGGCAG TCAGAACCCC
AATTACACTG ATTGGATGGG CCTTGGAACA GTCGACCGAG ATTCCATTCT CGCACAGCTC
ATCAACATGC TCATCGCGCC TTCCACTATG ACTGCGCTGA GGATGGAGTG GGCTCCGGCA
CTCGATGATC TGCTGACCGA CGTGCCCGAT TTACGGCCAC GACGCAGTTC CTTGCAGGCA
AGCGCCGACC CGGCAGGCCG CGCGTCGAAA TGGCCGGCGC TGCCTGCGAT CTTAAAAAGA
CCGGAATAA
 
Protein sequence
MFRFGGVAIR VSAAHSSLVL WSFLDMYFSP YFEMVDSTGD ALLALDVEVV IGACESRIDA 
RQCSEVEVDR SGGFLRCKGF WIDRGSTRMV HLDPFAVDVC IDRERRRAVV TGQDELTLRV
PLLRIIEDAC VAALESRGAV FIHASAVAVG AKAILLVGNK GSGKTTSLCR LLKLFDVSKL
ANDNVVLWLE DASVIVRGWP SFFKVAAATV ATQEELTHLF PSALRHLLDH GDQLWKVYEK
IAIYPTEAAE LFDRQIQPQA VISTIILPRF GKDLVPRLTT ISRDELCDEI GLYIQGSQNP
NYTDWMGLGT VDRDSILAQL INMLIAPSTM TALRMEWAPA LDDLLTDVPD LRPRRSSLQA
SADPAGRASK WPALPAILKR PE