| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3850 |
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| Symbol | |
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| ID | 3969117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4277396 |
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| End bp | 4279918 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926960 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_533702 |
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| Protein GI | 90425332 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.550588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC GCGTCGAACG CCCCGCCGCG GCAATCAGCG CCATCCGGCT GCACAAGCGG
CTCGAAGCAC TGTGGGGCAC GCCCGGTGGA TGGCAGCGGT TGTCGGCGGT GAACCACAAC
ATCGTCGGCC GCCGCTTCAT CGTCACCGCC TTCGTGTTCT TCGGCGTCGG CGGCGTGCTG
GCGATGCTGA TCCGGGCACA GCTCGCGACC CCGCGCAGCG CGTTCCTCGG ACCGGACATC
TACAACCAGG TCTTCACCAT GCACGGCACG GTGATGATGT TTCTGTTCGC GATTCCGATG
TTCGAGGGAC TGGCGATCTA TCTGTTGCCG AAAATGCTCG GCGCGCGCGA CATGGCGTTC
CCGCGGCTCA GCGCCTACGG CTATTGGTGC TATCTGTTCG GCGGATCGAT GCTGCTGATC
GGGCTGTTCC TTGGGCTTGC GCCCAATGGC GGCTGGTTCA TGTACACGCC GCTGAGTTCG
AAGACCTACA CCCCCGGCAT CAATGCCGAT CTCTGGCTGA TCGGCGTCAC CTTCGTGGAG
ATTTCGGCGC TGTCGGCCGC GATCGAGATC ATCGCCACGA TTCTGAAGCT GCGCGCCCCC
GGCATGTCGC TCGACAAGAT GCCGCTGCTG GCGTGGTATC TGCTGGTCAC CGCCTTCATG
ATGCTGTTCG GCTTTCCGCC GCTGATCCTC GGCTCGGTGC TGCTGGAGAT CGAGCGCGCC
TTCAACATGC CGTTCTTCGA TCCGACGCGC GGCGGCGATC CGCTGCTGTG GCAACATCTG
TTCTGGCTGT TCGGCCATCC CGAAGTCTAC ATCATCTTCC TGCCGGCGGC GGGCATGGTC
TCGACCATCC TGCCGGTGCT CGCGCGGCGC GAGATCATCG GCTACAGCTG GATCGTGGTC
AGCATCGTGG CGCTGGCGTT CCTGAGTTTT GGGCTGTGGG TCCACCACAT GTTCACGGTG
GGGATTCCCC ACCTCGCGCT GGCGTTCTTC TCCTCGGCCA GCACCGCGGT CGCGGTGCCG
ACCGCGGTGC AGATTTTTGC CTGGATCGGC ACGCTGGCGG CCGGCCGCCC GCAGCTCAAG
CTGCCGATGC TGTATCTGCT CGGCTTCTTC TCGGTGTTCG TAGTCGGCGG TCTCACCGGC
GTGATGCTGG CGATCGTGCC GTTCAACTGG CAGGTCCACG ACACCCATTT CGTGGTCGCG
CATCTGCACT ATGTGCTGGT CGGCGGCTTC GTGTTTCCGA TGCTGGCCGC GGCGTATTAC
TGGCTGCCGC ATTTCACCGG ACGCGTGCCG CGGCACAGCC TGGGCGTCGC GGCGTTCTGG
CTGATCTTCC TCGGATTCAA TCTGACTTTC CTTGTCATGC ACTGGACTGG CCTGCTCGGC
ATGCCGCGCC GGATCACCAG CTACGGCGCC GACACCGGCT GGGAATGGCC AAATCTGCTG
TCCTCTGTCG GCGGCTTCGT GATGGCGATC GGTTTCGCCA TGTTCACGGT CGACGTGCTG
ATGCAGTGGC TGCACGGCAA GCCCAGCGCG CGCAACCCGT GGCACGCCGG AACGCTCGAA
TGGGCCATGC CGACGCCGCC GCCGGACTAC AACTTCGCGT CGCTGCCGCA AGTGTCGTCG
CGCAGCCCGC TCGCCGACCG GCCGGTCCTC GGCAACAGCC TCGTCCGCGG CGCCGGTTAT
CTCGGCTTCG TCCGCAACGA CTGGCTGGAA ACCCTCGGCG TCGAGGTGAT GTCCGGGCGG
GTCGAACAGA TCGTCCGGCT GCCCAATCGC ACCCTGCTGC CGCTGATCAC CGCGCTGGTG
ACGGACGTGT TCTTCCTCGC GGTGTTGTTC AAGATCTATC TCGTCGCGTT GCTCGCGCTT
GCCGCGACCG TTGCAGCCTT GCTGGCCTGG ACCCCGGTCT CCGGCGAACG CCGCGATCAT
GGCGCACTGC CGATCGGCGC TGGCGCCCGC GCGGTGCTGC ACAGCGAGGC GGAGTCCCCG
CCGTCATTAT GGGCGATGGG ACTGACGCTG GCCGCCAACG GCACCGCTTT CGCCTCGCTG
GCCTTCGGCA TTCTGTTCCT GTGGGTGGTG GCGCCGAACT GGCCGCCACC GGCTTTGGTA
GCGTGGGCGC CATGGAGCAC CCTGCTGGCA GTAAGCGGAT TCTCGGTGGC TTTCATTGCC
GGCCGGATCG CCACATCGCA CCGCGTGATC AGCAGCGCGC CCAACCGCGA AATCGCCCTG
GCGGTCGCGG CACATGGCCA GATCGCCGCG CTGCTCGGCT TTGCGGCTAT CGTCCGGTCG
CTGCCCGACC CGACCCAGCA CGCCTACGCT GCGGCCAACA CCATCATTCT GCTCTATGCG
GGATTGCAGA GCGCGATCGG CCTCATATTC GTAAGCTTCG GGATCTGGCG AAGCCGCACC
GGCTACGTAT CGCCGATCCG CAGCGTCGAC CTGCGGATCG GCGCGATGTG GCACGGCTCC
ACCGCAGCGA TCGGTGCCGC AACGCTGCTG ATCGTCTACG GGCTGCCGCA GGTGATGCGG
TGA
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| Protein sequence | MDERVERPAA AISAIRLHKR LEALWGTPGG WQRLSAVNHN IVGRRFIVTA FVFFGVGGVL
AMLIRAQLAT PRSAFLGPDI YNQVFTMHGT VMMFLFAIPM FEGLAIYLLP KMLGARDMAF
PRLSAYGYWC YLFGGSMLLI GLFLGLAPNG GWFMYTPLSS KTYTPGINAD LWLIGVTFVE
ISALSAAIEI IATILKLRAP GMSLDKMPLL AWYLLVTAFM MLFGFPPLIL GSVLLEIERA
FNMPFFDPTR GGDPLLWQHL FWLFGHPEVY IIFLPAAGMV STILPVLARR EIIGYSWIVV
SIVALAFLSF GLWVHHMFTV GIPHLALAFF SSASTAVAVP TAVQIFAWIG TLAAGRPQLK
LPMLYLLGFF SVFVVGGLTG VMLAIVPFNW QVHDTHFVVA HLHYVLVGGF VFPMLAAAYY
WLPHFTGRVP RHSLGVAAFW LIFLGFNLTF LVMHWTGLLG MPRRITSYGA DTGWEWPNLL
SSVGGFVMAI GFAMFTVDVL MQWLHGKPSA RNPWHAGTLE WAMPTPPPDY NFASLPQVSS
RSPLADRPVL GNSLVRGAGY LGFVRNDWLE TLGVEVMSGR VEQIVRLPNR TLLPLITALV
TDVFFLAVLF KIYLVALLAL AATVAALLAW TPVSGERRDH GALPIGAGAR AVLHSEAESP
PSLWAMGLTL AANGTAFASL AFGILFLWVV APNWPPPALV AWAPWSTLLA VSGFSVAFIA
GRIATSHRVI SSAPNREIAL AVAAHGQIAA LLGFAAIVRS LPDPTQHAYA AANTIILLYA
GLQSAIGLIF VSFGIWRSRT GYVSPIRSVD LRIGAMWHGS TAAIGAATLL IVYGLPQVMR
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