| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3728 |
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| Symbol | |
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| ID | 3971473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4148081 |
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| End bp | 4149946 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926838 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_533582 |
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| Protein GI | 90425212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC TCAATCGCCG GCATCTGCTC GGTCTCGGTG TCGGTGCGGT GGCCGCCGCC
TCGTTGCGGC CGGCGCTTGC GGCCGAGGGC GGCGAGATCG AGGCGCACGG CATTTCGGCG
TTCGGCGATC TGAAATATCC GGCGGATTTC CATCATTTCG ACTACGTCAA TGTCGACGCG
CCGAAGGGCG GGGTGTTTTC GACCAATCCG TCCTACCGGT CCTTCAACCA GTCGTTCCTG
ACCTTCAACT CGCTCAACGC CTTCATCTTC AAGGGCGACG GCGCGCAAGG CATGGGCCTG
ACTTTTGCGC CGCTGATGGC GCGCGCCGGC GACGAGCCCG ACGCGATGTA CGGCCTGGTT
GCCAAATCGG TGAAGATCTC CGCCGATGGG CTCGGCTATC GCTTCACGCT GCGGCCGGAG
GCGCGGTTTC ATGATGGCTC GAAGCTCACC GCCCACGACG CGGCGTTTTC GCTGACCGTG
CTGAAGACCA AGGGGCATCC CTTGATCACC CAGCAGATGC GCGACGTGGT CTCGGCGGAA
GCGCTCGACG ACTTAACGCT GCTGGTGAGG TTTTCGGCCA AGCGCGGCCG CGACGTGCCG
CTGTTCGTGG CGGGGCTGCC GATCTTTTCG CAGGCCTATT ACGCCAAACA TCCGTTCGAT
GAGTCGACGC TGGAGGCGCC GCTCGGCTCT GGCCCCTACA AGGTCGGCAA GTTCGAAGTC
GGCCGCTACA TCGAATTCGA GCGGCTGCAG GACTGGTGGG GCGCCGAGCT GCCGGTCAAT
CGCGGAGCCA ACAATTTCGA CGTGGTGCGT TACGACTTCT ATCGCGACCG CGACGTCGCC
TTCGAGGGCT TCACCGGCCG CAGCTATCTG TATCGCGAGG AGTTCACCTC GCGGGTCTGG
AACACGCGCT ATGATTTTCC GGCGATCCTC GACGGCCGGG TGAAGCGCGA AACCCTGCCG
GATGAAACGC CCTCCGGGGC GCAGGGCTGG TTTCCCAACA CCCGCCGCGA CAAGTTCAAG
GACCCGCGGG TGCGCGAGGC GCTGGGCTGC GCGTTCGATT TCGAATGGAC CAACAAGACC
CTGATGTACG GCGCCTATCT CCGCACGGTA TCGCCGTTCC AGAACTCCGA CCTGATGGCC
AACGGTCCGC CGTCGCCGGA AGAAGTGGCA TTGCTAGAGC GCTTCCGCGG CCAGGTGCCG
GAGGAGGTGT TCGGCGCGCC CTATGTGCCG CCGGTGTCCG ATGGCTCCGG GCAGGACCGC
GCGCTGTTGA AGAAGGCGGT GCAACTGCTG CAGGACGCCG GCTGCGTGAT CAAGAACGGC
AAGCGGATGA CGCCGCAGGG CGAACCGTTC ACGATCGAGT TTCTGCTCGA CGAGCCGACC
TTTCAGCCGC ACCACATGCC GTTCATCAAG AATCTCGCCA CGCTCGGCAT CGAGGCGTCG
CTGCGCATGG TCGATGCCGT GCAGCATCGC GCCCGGCGCG ACGATTTCGA TTTCGACCTC
ATCATCGAGC GCTTCGGCTT CTCGACGGTG CCGGGCGACT CGCTGCGGCC GTTCTTCTCG
TCGCGCGCGG CGGCCACCAA GGGCTCGAGC AATCTCGCCG GGATCGCCGA TCCGGTGGTC
GATGCGCTGG TCGAAGACGT CATCGCCGCC GACACCAGGG TCAAGCTGGT GGTCGCCGCG
CGCGCGCTCG ACCGCGTGGT CCGCGCCGGC CGCTATTGGG TGCCGCAATG GTATTCGGGC
TCGCATCGGG TGGCCTATTG GGACGTGTTC GGCCATCCGG CGAAACTGCC GAAATATCTC
GGCGTCGCAG CACCCGATCT GTGGTGGTCG ACCGTGAAGT CCGCAGCGAC CGAACAGGCG
AAATAG
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| Protein sequence | MAELNRRHLL GLGVGAVAAA SLRPALAAEG GEIEAHGISA FGDLKYPADF HHFDYVNVDA
PKGGVFSTNP SYRSFNQSFL TFNSLNAFIF KGDGAQGMGL TFAPLMARAG DEPDAMYGLV
AKSVKISADG LGYRFTLRPE ARFHDGSKLT AHDAAFSLTV LKTKGHPLIT QQMRDVVSAE
ALDDLTLLVR FSAKRGRDVP LFVAGLPIFS QAYYAKHPFD ESTLEAPLGS GPYKVGKFEV
GRYIEFERLQ DWWGAELPVN RGANNFDVVR YDFYRDRDVA FEGFTGRSYL YREEFTSRVW
NTRYDFPAIL DGRVKRETLP DETPSGAQGW FPNTRRDKFK DPRVREALGC AFDFEWTNKT
LMYGAYLRTV SPFQNSDLMA NGPPSPEEVA LLERFRGQVP EEVFGAPYVP PVSDGSGQDR
ALLKKAVQLL QDAGCVIKNG KRMTPQGEPF TIEFLLDEPT FQPHHMPFIK NLATLGIEAS
LRMVDAVQHR ARRDDFDFDL IIERFGFSTV PGDSLRPFFS SRAAATKGSS NLAGIADPVV
DALVEDVIAA DTRVKLVVAA RALDRVVRAG RYWVPQWYSG SHRVAYWDVF GHPAKLPKYL
GVAAPDLWWS TVKSAATEQA K
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