| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3657 |
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| Symbol | |
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| ID | 3972029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4072992 |
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| End bp | 4074245 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637926767 |
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| Product | periplasmic protein-like |
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| Protein accession | YP_533511 |
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| Protein GI | 90425141 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAA CGTGCGTATG TCGCGCCTCA ATGGGGTCAC ACCAAAGATT TGGATTGAAT
GTGTTGCCAA GGCTACTGAT AGACCGATTT TCGTTGTGTT GTGTCTTGCT CACAATTGCG
ACCCCCACGT ACGGCGCGGA GAAGTTCGAT TACGACATCA AATCGCCGAT GGTATTTCTT
GCTGGTTACA ACGGCGGCAA TTGCAATGGT TGCGAATGGA TTATTGCCGA AGGAACGATT
ACTTCGGAAA CACCCGCGCT GTTTAAAGCC TACCTAGAAA AGAAGAAGCC AAATCGCGGT
GCATCCATTC AATTGAATTC TCCTGGCGGG AATCTGATAG CGGGGATTAA GCTTGGCGAA
CTGATCCGGT CTGCCGGGCT CATCACGTTG GTCGGAAAGA CCGTAGGTGA GCGGGCGTCC
TTCGATCGAG AAGCCATAAA AGATGAAGGC GAAGTAGCTC CCGAAAGCGC GAAGAGAGAG
CCCATTTGTG CCTCTGCGTG CGTATATGCA TTTGTAGGCG GTGAGACGCG GTTTGCCACT
AAGGCAAAGA TAGGAGTTCA CCAGTTCTAT GATGGCAAAT CGGCTAGCGA CCCTCTCGCA
AAGACAGCGA GCTCCATTGA TCGATCCGCA GATCAGCTGT TGGCTGGCCT CCTCCTCGAA
TATGTAATCA GGATGGGAAT TGATCCAAAG CTTATCGCAA TAGCGAGTTC AGTCCCTCCG
TGGGGCGAAA TGAAATGGCT TACGGACCAA GAACTTACCG AGTTGAAGAT CGACAATTCG
GAAGTATCAT ACACGCCCCT TTCTGTCGAA CCTTTCGGGA CGCAAGGTTC ATTTGCGGAA
ACCAGGAGCA GATCAATCTA CTATAGCTTC CACCACCGTA TTTACTGCAA GGATCGACCA
GACAGCGTTT ATCTCGCCTT CAGTTTCGAC GCAAAAGGTG GCAACGCTGA TTATGTGAAG
AGTATGTTTG AAGGAGTTCT ATCAAGCTCA TCGATTGAAC TTGGCACCAG CAAAGGCGCA
CAGTTCTTTC CCTCCAAACT GTTTGGCGTA GTTGTTACAA AAGGGGAGCA ACCAACGGTC
CAAGCCTCTA CCTTGGTCGT AGGAGCGACG ATGGCAGACT TTCAAGCTGC TGATCGCGTC
TCCATCAACA GCAACCTCTC TAAGCACGAG GGCAATATGG CGTTCTGGAT GTCGTTTCCC
ATTAAGGGCG ACCGCCGAAA GATTGGAATC GTAGCTCGAT CCTGTGTTAA ATGA
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| Protein sequence | MRITCVCRAS MGSHQRFGLN VLPRLLIDRF SLCCVLLTIA TPTYGAEKFD YDIKSPMVFL
AGYNGGNCNG CEWIIAEGTI TSETPALFKA YLEKKKPNRG ASIQLNSPGG NLIAGIKLGE
LIRSAGLITL VGKTVGERAS FDREAIKDEG EVAPESAKRE PICASACVYA FVGGETRFAT
KAKIGVHQFY DGKSASDPLA KTASSIDRSA DQLLAGLLLE YVIRMGIDPK LIAIASSVPP
WGEMKWLTDQ ELTELKIDNS EVSYTPLSVE PFGTQGSFAE TRSRSIYYSF HHRIYCKDRP
DSVYLAFSFD AKGGNADYVK SMFEGVLSSS SIELGTSKGA QFFPSKLFGV VVTKGEQPTV
QASTLVVGAT MADFQAADRV SINSNLSKHE GNMAFWMSFP IKGDRRKIGI VARSCVK
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