| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3649 |
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| Symbol | |
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| ID | 3972020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4059775 |
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| End bp | 4060509 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637926758 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_533503 |
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| Protein GI | 90425133 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.590428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC GCCTGCAGGG CAAACGCGCG CTGGTGACCG CCGCCGCGGC CGGCATCGGC
CGCGCCTGCG CGGTCGCGTT TGCGCGCGAC GGCGCCACGG TGATCGCCAC CGACATCGAC
GAGGCGGCGC TGGCCTCGCT CGCCGCCGAA GGCGTCAGCG AGGTGCATCG GCTGGACGTG
CGCGACAGCG CCGCGGTCGC GGCCTTGGCG GCGCGCGCAG GCCGCGTCGA CATCCTGCTC
AATGCCGCGG GCTTCGTGCA TCACGGCAGC GTGCTGGATT GCTCCGACGA CGACTGGGAG
TTTTCCTTCG ATATCAACGT CAAGTCGATG CACCGCACCA TCCGGGCGTT TCTGCCCGGC
ATGCTCGATG CCGGCCGCGG CAGCATCGTC AACATCGCGT CGGCCGCCGG CGTGTTCAAG
GCGGCGCCGA ACCGCTACGT CTATGGCGCG ACCAAAGCCG CGGTGGCGGC ACTGACCCGC
GCGGTGGCGG TGGATTTCGT CACCAAGGGC ATCCGCTGCA ACGCGATCTG CCCCGGCACC
ATCGAGACGC CGTCGATGCT GCAGCGCGCC GCCGCCGCCG GACCGCAAGG CCGCGAGCTG
TTCGTGTCGC GGCAGCCGAT GGGCCGGCTC GGCACGGCTG AGGAAATCGC AGCACTCGCG
GTCTATCTCG CCAGCGACGA AAGCAGCTTC ACCACCGGCG TCGCCCATAT CATCGACGGC
GGCTGGACGC TGTGA
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| Protein sequence | MSDRLQGKRA LVTAAAAGIG RACAVAFARD GATVIATDID EAALASLAAE GVSEVHRLDV
RDSAAVAALA ARAGRVDILL NAAGFVHHGS VLDCSDDDWE FSFDINVKSM HRTIRAFLPG
MLDAGRGSIV NIASAAGVFK AAPNRYVYGA TKAAVAALTR AVAVDFVTKG IRCNAICPGT
IETPSMLQRA AAAGPQGREL FVSRQPMGRL GTAEEIAALA VYLASDESSF TTGVAHIIDG
GWTL
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