| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3579 |
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| Symbol | |
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| ID | 3972818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3981412 |
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| End bp | 3982602 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637926689 |
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| Product | patatin |
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| Protein accession | YP_533436 |
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| Protein GI | 90425066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCATC CTCGTCTTCG ATCCACCGTC CTGCCGGTCC TCGTTGTGAC GCTCGGCCTT
CTCGTCGCCG GATGCTCGTC TCTGCCCAGG ACGCCATATA GCGTCGGGGA TGCTTCCTCT
GCGCGGGTCC TCGATCTTGT CGACCTGCGT CGCTACGCCG ACCAACCGGC CGGCACATTC
ATGCAGGCCA ATCACCAACT GATGTGGCGG GGGGCGCGGA CCTACCTGGC GCTGTCGGGC
GGCGGGGCGG ATGGTGCCTA TGGCGCCGGT GTGCTCAATG GCTGGTCGGA GGCGGGCGCG
CGGCCGTCAT TCTCAATCGT GTCTGGCGTC AGCACCGGCG CATTGATCGC GCCATTCGCG
TTTCTCGGTT CTGACTACGA CACGACGCTG CGCGAAATCT ACACCAGCGG CATTGCCGCA
AGTCTCCTCG AAGACCCCAA CCCGTTGAAA GCTATTTTCG GTTCGGGTCT GTTCGGAAAC
GCGAAAATGC GCGAGCTGGC AGCCAAATAC TATGATGCCA ATGTCGTCGC TGCAGTCGCC
GTTGAATACG CCAGAGGCCG GCAACTTGCG ATCGTGACGA CGAATATCGA CTCCCAGCGC
ACCGTGATCT GGGACATGGG GCGTATCGCT TCGCTTGGGA CGCCGGAGTC GTTGCGTCTG
TTCCAGGACG TCGTCGCCGC TTCGGCAAGT GTGCCAGTGG TGTTTGAGCC GATGCTCATC
ACTGCCGCAG CGAACGGCAA GCAATTTCAG GAGATGCATA TCGATGGTGG CGTGACGGCG
CCCGTCCTGA CCCTCCCCGA GGCTTTCCTG CTCCGTAACG CGGCTCCGGC CAAACCGGAA
AATTTGCAAC TGTTCATCCT GATCAACAAC AAGGTTGAAC GGGAATTCCA GCTCGTCACC
AACAGCACCG TCGAGATTGC AGCACGATCG TCCTCGACCA TGTTGAAGAC GCAGACGCGA
TCGATCCTTT ACAACACTTA CGCCTTCGCG CGGCGTAATA AATTCGGCTT CAACCTGACC
TATATCGAAG GCGACAGACC GTTGTCGCCT GCCGGATTCG ATACCGCCTA CATGCGCGAA
CTATTCCAGT ATGGCTACGA CAGAGCCCGA AGCGGCCACG TCTGGTCGCA ATCTCCTCCT
GCCGATAACA ACGAGGCGCC CTCCGCGTCT CGAATTGCAG CCGCACGGTG A
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| Protein sequence | MHHPRLRSTV LPVLVVTLGL LVAGCSSLPR TPYSVGDASS ARVLDLVDLR RYADQPAGTF
MQANHQLMWR GARTYLALSG GGADGAYGAG VLNGWSEAGA RPSFSIVSGV STGALIAPFA
FLGSDYDTTL REIYTSGIAA SLLEDPNPLK AIFGSGLFGN AKMRELAAKY YDANVVAAVA
VEYARGRQLA IVTTNIDSQR TVIWDMGRIA SLGTPESLRL FQDVVAASAS VPVVFEPMLI
TAAANGKQFQ EMHIDGGVTA PVLTLPEAFL LRNAAPAKPE NLQLFILINN KVEREFQLVT
NSTVEIAARS SSTMLKTQTR SILYNTYAFA RRNKFGFNLT YIEGDRPLSP AGFDTAYMRE
LFQYGYDRAR SGHVWSQSPP ADNNEAPSAS RIAAAR
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