| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3558 |
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| Symbol | |
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| ID | 3973758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3955435 |
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| End bp | 3956619 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926669 |
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| Product | replication protein A |
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| Protein accession | YP_533416 |
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| Protein GI | 90425046 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGACC TCGATGAGCC ACGCCGGCCT GCGCCGTGCG AAAGCGAGCG GACCCGGCTC
GATCCGTTCG TGGTGATCGG CGGCGACGCC AGCCCGCGCG ATCAGCGCGA TCTGATGGAG
CGACCGTTCT TCTCGCTGTC GAAATCGCCA CGCACCAAGC CGATCCTCTA CCGCGCCAAT
GACGTCGAGG TGCAGGTGTT CGGCATGCCC AAGCATGGCA TGGCGACGAT TTGGGACGCC
GACGTGCTGA TCTGGGCTGC GAGCCAGATT GTTCGGGCCG AGAACCTGGG CCTTACCACG
TCGCGCTTCT TTCGCTTCAC GCCGTATCAG CTGCTGCGCG GTGTTGGTCG CCCGACCGGC
AACCAGCAGT ACCTGCTTCT GAAAGCGGCG CTGGCGCGGC TGCAGTCCAC CGTCATCGCC
ACCACCATCC GCAACGGGGA GCATTGGCGG CGCCGGCAAT TCTCCTGGAT CAACGAATGG
GAGGAGATGT CGACGCACAG CGGCCGCGTC GAGGGCATCG AATTCGTGCT GCCCGATTGG
TTCTACAATG GCGTGATCGA TCGATCGCTG GTGCTGACCA TCGATCCTGC CTACTTCCGG
CTGACGGGCG GCATCGAGCG CTGGCTCTAC CGGGTTGCGC GCAAGCACGC CGGCCACCAG
CGACAGGGCT GGGTGTTCGA GGTGGCACAT CTCCACGCCA AATCGGGCAG CCTCGCGCGC
GCCTCCGATT TCGCGCTCGA CATCAGGCGC ATCGCGGCGC GTCAGCCGCT GCCCGGTTAC
CGGGTGCTGA TCGAGCGCGA GGGGCGCTCC GAGCTGCTGC GCATCCTGCC GGTCGATTTG
TCCACAGTGC CTGTGCAGAA ACTTGTGAAC AGGCTCGGCA GATCAGGCGC ACGGGTATCG
GCAGATCAGG CGCAAACCCT ATCGGCAGAT CAGGCGCACC AACCGCAACT AAACCTTTGG
CCGGAACAGC AAAATCAGGC TGCTAACTTA GAGTCTAACA TAGATTCTAA CTCTTCTGTT
TTGTACGGCG TACAAGTGCG CCGTAGTGCC GGTGCCGGCT TTCGTGGACC GGTGCACACT
ACCATCGCCC CGCATCCAAC CACTTCAACC GCAGCCGAAG AGGAACCGTC GCAAGCCAGC
GGTGGAGTCG ATCGCGTTCC GAACTCCGAA AGGAGCAAGC GATGA
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| Protein sequence | MRDLDEPRRP APCESERTRL DPFVVIGGDA SPRDQRDLME RPFFSLSKSP RTKPILYRAN
DVEVQVFGMP KHGMATIWDA DVLIWAASQI VRAENLGLTT SRFFRFTPYQ LLRGVGRPTG
NQQYLLLKAA LARLQSTVIA TTIRNGEHWR RRQFSWINEW EEMSTHSGRV EGIEFVLPDW
FYNGVIDRSL VLTIDPAYFR LTGGIERWLY RVARKHAGHQ RQGWVFEVAH LHAKSGSLAR
ASDFALDIRR IAARQPLPGY RVLIEREGRS ELLRILPVDL STVPVQKLVN RLGRSGARVS
ADQAQTLSAD QAHQPQLNLW PEQQNQAANL ESNIDSNSSV LYGVQVRRSA GAGFRGPVHT
TIAPHPTTST AAEEEPSQAS GGVDRVPNSE RSKR
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