| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3554 |
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| Symbol | |
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| ID | 3973754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3952910 |
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| End bp | 3953635 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926665 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_533412 |
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| Protein GI | 90425042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.930583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCG CGCTGGCGTT GCAGGTCAGC GCGATCAGCG CGGTCTCTGC CGAGCCCGTG
AAGTTGGATG CTGCAGCGAT GGCGACCGAT TTCGCCGATC GCTATGCCGC GGAGATCGCC
GAGGCTTCGC AACGATTTGG CATTCCGGAA AGCTGGATCC GGGCGGTGAT GCGCGTCGAA
AGTGGCGGCC GCGTACGCGC GGTGTCGCCG AAAGGCGCGC TCGGCTTGAT GCAGATCATG
CCCGAGACCT GGGCCGGATT GCGACTGCGC CACCGGCTCG GCGGCGATCC CTATGATCCA
CGCGACAACA TTTTGGCGGG CGCGGCATAT TTGCGTGAGA TGCACGATCG TTACGGCGCA
ACGGGCTTTC TCGCCACCTA CAATGCCGGC CCCGGTCGTT ATGCTGAATA TCTCAGCATT
GGCCGCCCAT TACCCGCGGA AACGCTGGCC TATGTCGCGG CACTTGCGCC TTTGATGGAC
GCTGAACCGC ACAACCGCAA CGCCACGATC GCCGCCGCCT TCAGAGCATG GAGCAGCGCT
CCGCTGTTCG CTGTGCTGGC CGACAGCACC GCGTCCGTCA ATCGGCTGCA GGCCGATGGT
CGGTGGCGTG CACGTTCGGT GACCGATCTT TCGGGGCTTG AGCCGCTGCA TAGTTGGCAG
CCGCACGATA GACGACGCGC GGCGTCATTG TTCGTGACGC GCGCTGCAGA CCGCTCCTCG
CGTTAG
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| Protein sequence | MAVALALQVS AISAVSAEPV KLDAAAMATD FADRYAAEIA EASQRFGIPE SWIRAVMRVE
SGGRVRAVSP KGALGLMQIM PETWAGLRLR HRLGGDPYDP RDNILAGAAY LREMHDRYGA
TGFLATYNAG PGRYAEYLSI GRPLPAETLA YVAALAPLMD AEPHNRNATI AAAFRAWSSA
PLFAVLADST ASVNRLQADG RWRARSVTDL SGLEPLHSWQ PHDRRRAASL FVTRAADRSS
R
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