Gene RPC_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3552 
Symbol 
ID3973752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3950209 
End bp3950496 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content65% 
IMG OID637926663 
Producthypothetical protein 
Protein accessionYP_533410 
Protein GI90425040 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.277818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG CCATCCGATC CGAGAAACTC GATCTGCGGC TGACGCCGGA GGCGAAGCGT 
TTGCTAAATG CCGCCGCGCA AGCCTCGCGA CGCTCGGTCA GCGAATTCGT GCTGGAGAGC
GCGCTCGACC GCGCACAGGA AGCTCTGCCC GACCGTCAGC ATTTTGGTCT CGACGCTGCA
GGCTGGGAGG CGTTTCTGGC AGCACTCGAT GCACCGCCCC GCCCGTTGCC GCGGCTGCAG
CGGCTGTTGA CCGAACCCAG CGTGTTCGAG CAAGCCCCGA CCGAATAG
 
Protein sequence
MANAIRSEKL DLRLTPEAKR LLNAAAQASR RSVSEFVLES ALDRAQEALP DRQHFGLDAA 
GWEAFLAALD APPRPLPRLQ RLLTEPSVFE QAPTE