| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3490 |
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| Symbol | |
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| ID | 3972857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3876026 |
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| End bp | 3877615 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926602 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_533349 |
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| Protein GI | 90424979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC GTGAATTTGC CAAATTGGGT CTGGCCGCGG GCATGGTCAG CATCGGCGGT
TTTCCGATCG GCGTGACCCG TGCGGCGGGA CAGAGCCGCG GCGGCACGCT CAACACCATC
ATCCAGCCGG AGCCGCCGAT CCTGGTCACC GCGCTCAATC AGCAGCAGCC GACGCTGACG
CTCGGCGGCA AGATCTATGA GAGCCTGCTG CGCTACGATT TCGATCTGAA GCCGATGCCC
GGCCTGGCGC AGTCCTGGGA GATCTCGCCG GACCGGCTGA CCTACACCTT CAAGCTGTAT
CCGAACATCA CCTTCCACGA CGGCACGCCG CTGACCTCCG AGGACGTGGT GTTCTCGGTG
ATGAAGATTC TGATCGAGAA CCACTCCCGC GCCCGCAGCA CCTTCTCGCG GATCGACAAG
GCGGAGGCGC CGGACCCGGT CACCGTGGTG TTCAAGCTGA AAGCGCCGTT CTCGCCGTTC
CTCACCGCGT TCGATTGCAC CACCGCGCCG ATCGTGCCGA AGCACATCTA TGAAGGCACC
GACTTCCGCA AGAACCCGGC CAATGCGCGA GCAATCGGCT GCGGTCCGTT CAAGCTGAAG
GAATGGGTGC GCGGCTCGCA CGTGCATCTG GTCAGGCACG AGGGCTACTA TCGTCCCGGC
GAACCCTATC TCGACGAGAT CATCTATCGG GTGATCCCGG ATTCGGCGTC GCGCTCGGTG
GCGCTGGAGC AGGGCACCGT GCAGCTGACG CAGTGGTCGG ACGTGGAGTC GTTCGAGGTG
CAGCGGCTGT CGAAGCTGCC CAATCTCGCG ATGACCACCA AAGGCTATGA ATTCTTCGCG
CCGCATCAGT GGCTGGAATT CAACAACCGC ATCGCGCCGA TGAACGACAA GCGCTTCCGC
CAGGCGGTGC TGTTCGCGAT CGATCGCAAG GCGCTGCTCA ATCGGGTGTA TTTCGGCCTC
GGCAAGGTCG CCACCGGGCC GGTGTCGTCG AAGACCAAAT TCTACGAGAA GGACGTCAAG
CCCTACGACT ACTCGCTCGA CAAGGCTAAG GCGCTGCTCG ACGAGATGGG CCTGAAGCCC
GGTGCCGACG GCAAGCGCGT CAGCATTCCC TATCTGGTGC CGCCTTACGG CGAATCGCAT
CAGCGCACCG CGGAGTTCAT TCGCCAGTCG CTGGCGCGCG TCGGCATCGA CCTGCAGCTG
CAGGGCATCG ATCTCGCCGG CTGGGCCGAC AAGTACAGCA ACTGGGATTT CTCGATGACC
GCGACCGTGG TCTATCAGTT CGGCGATCCG GCGCTCGGCG TGGCGCGGAC CTACGTCTCC
TCCAACATCC ACAAGGGCAT TCTGTTCTCC AACACCGCCG GCTATTCCAA TCCGGAGGTC
GACCGGCTGT TCGAGGAAGC CGCGGTAGCG GGCGACGATG CCAAGCGCCA GCAATGCTAC
AGCGACGCGC AGAAGCTGAT CGTCGAGGAC GTCCCGGTGG CCTGGCTGCT GGAGATGGAT
TATCCGAATT TCATGGATAA GCGGCTGAAG AACGTCATCA CCACCGCGAT CGGCGTGCAC
GACACCTTCG GCACGGTCTC GTTCGCATGA
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| Protein sequence | MNRREFAKLG LAAGMVSIGG FPIGVTRAAG QSRGGTLNTI IQPEPPILVT ALNQQQPTLT
LGGKIYESLL RYDFDLKPMP GLAQSWEISP DRLTYTFKLY PNITFHDGTP LTSEDVVFSV
MKILIENHSR ARSTFSRIDK AEAPDPVTVV FKLKAPFSPF LTAFDCTTAP IVPKHIYEGT
DFRKNPANAR AIGCGPFKLK EWVRGSHVHL VRHEGYYRPG EPYLDEIIYR VIPDSASRSV
ALEQGTVQLT QWSDVESFEV QRLSKLPNLA MTTKGYEFFA PHQWLEFNNR IAPMNDKRFR
QAVLFAIDRK ALLNRVYFGL GKVATGPVSS KTKFYEKDVK PYDYSLDKAK ALLDEMGLKP
GADGKRVSIP YLVPPYGESH QRTAEFIRQS LARVGIDLQL QGIDLAGWAD KYSNWDFSMT
ATVVYQFGDP ALGVARTYVS SNIHKGILFS NTAGYSNPEV DRLFEEAAVA GDDAKRQQCY
SDAQKLIVED VPVAWLLEMD YPNFMDKRLK NVITTAIGVH DTFGTVSFA
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