Gene RPC_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3420 
Symbol 
ID3970464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3807838 
End bp3808302 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content61% 
IMG OID637926531 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_533279 
Protein GI90424909 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.124611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA AAGCCTCTGC CGTCGAGGGA AGCTGCAGAT GCGGACAGGT GCGGATCAGG 
ATCAGCGCTC CGCCGCTGCT GACCATGGCC TGCCACTGCA CCGGATGTCA GAAGATGTCA
GCCAGCGCCT TTTCGCTCAG CGCTGCGTTT CCCAGCGCGG CGTTTGCGGT CACCCAAGGT
GAGCCTGTCA TTGGCGGGTT GCACGGAGCG GCCCGCCACT ATTTCTGCCC GCATTGCATG
AGCTGGATGT TCACCCGGCC GGAGGGGATC GATTTTCTGG TCAATGTTCG CGCGACGATG
CTGGAGGACG CCCACGGCTT CACGCCATTC ATCGAGACCT TCACCAGCGA GAAACTGCCT
TGGGCGACGA CGCCCGCTGT CCATAGCTTT CCAGCATTCC CAGCACTTGA TCAATATGAA
GGACTGACGA AGGCTTATGC CGAGGCGACC GCCGCGCCGA GCTAG
 
Protein sequence
MNAKASAVEG SCRCGQVRIR ISAPPLLTMA CHCTGCQKMS ASAFSLSAAF PSAAFAVTQG 
EPVIGGLHGA ARHYFCPHCM SWMFTRPEGI DFLVNVRATM LEDAHGFTPF IETFTSEKLP
WATTPAVHSF PAFPALDQYE GLTKAYAEAT AAPS