| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3416 |
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| Symbol | |
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| ID | 3970460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3803238 |
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| End bp | 3804566 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926527 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_533275 |
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| Protein GI | 90424905 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.384623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.14611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGA AGCGCCCACA GCCATCGGAC AACCTGTTCG CCGCGGCGGG CATGGAGCGG
GATGCGCCGC ATCCGTTGCC GGACCGGCTG CGGCCGCGCG CGCTCGAAGA CGTGGTCGGG
CAGGATCACA TTCTCGGCCC CGACGGCGCG CTGACAAGGA TGCTGGAGAC CCGCACGCTC
GGCTCGCTGG TGTTCTGGGG GCCGCCCGGC ACCGGCAAGA CCACGGTCGC GCGGTTGTTG
GCCGACACCA CCGAACTGCA TTTCGAGCAG ATCTCCGCGG TGTTCTCCGG CGTCGCCGAT
CTGAAGAAAG TGTTCGACGC CGCCCGTGCC CGCCGCCAGA CCGGCCGCGG CACGCTGTTG
TTCGTCGACG AGGTGCACCG CTTCAACAAG GCGCAGCAGG ATTCCTTTCT GCCGGTGATG
GAAGACGGCA CCGTGGTGCT GGTCGGCGCC ACCACCGAGA ATCCGTCGTT CGAACTCAAC
GCCGCGCTGC TGTCGCGCGC GCGCGTGCTG GTGTTTCATT CGCTCGACGC GCAAGCGATC
GAGAAGCTCT ACGCCCACGC CGAAACGGTG GAAGCCAAGA AGCTGCCGCT CGATGCCGAG
GCGAGGGCGG TGCTGGTGCG GATGGCGGAT GGCGACGGCC GCGCCGCGCT GACGCTCGCC
GAAGAGGTGT GGCGCGCCGC GCGCGCCGAT GAGGTGTTCA ACGCCGAGCA GCTGCAGGAG
ATCCTGCAGC GCCGCGCGCC GATCTACGAC AAATCCGCCG ACGGCCATTA CAATCTGATT
TCGGCGCTGC ATAAATCGGT GCGCGGCTCA GATCCCGATG CGGCGTTGTA CTATCTGTGC
CGGATGCTCG ACGCCGGCGA AGATCCGTTG TTCCTGGCGC GCCGCGTGGT GCGGATGGCA
GTCGAGGACA TTGGCCTCGC CGATCCGCAA GCGCTGGTGA TCTGCAACGC CGCCAAGGAC
GCTTATGATT TCTTGGGCTC GCCCGAGGGC GAGTTGGCGA TCGCGCAGGC GGTGATTTAT
CTGGCCACCG CGCCGAAATC CAACGCCGCC TACAAGGCCT ACAAGGCCGC AATGCGCGCG
GCGAAGCAGG GCGGCTCGCT GCTGCCGCCG AAACACATTC TCAACGCCCC GACCAAACTG
ATGAAATCCG AGGACTACGG CGCGGGCTAT CAATACGATC ACGACACCCC GGAAGGCTTT
TCCGGCCAGG AGTACTTTCC CGACGCGCTC GGTCACCAGA CCTTCTACGA TCCGCCGGAC
CGCGGCTTCG AGCGCGAAAT CCGCAAGCGG CTGGATTACT GGGCGAAGCT GCGCAACAGC
AAAACCTAG
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| Protein sequence | MSPKRPQPSD NLFAAAGMER DAPHPLPDRL RPRALEDVVG QDHILGPDGA LTRMLETRTL
GSLVFWGPPG TGKTTVARLL ADTTELHFEQ ISAVFSGVAD LKKVFDAARA RRQTGRGTLL
FVDEVHRFNK AQQDSFLPVM EDGTVVLVGA TTENPSFELN AALLSRARVL VFHSLDAQAI
EKLYAHAETV EAKKLPLDAE ARAVLVRMAD GDGRAALTLA EEVWRAARAD EVFNAEQLQE
ILQRRAPIYD KSADGHYNLI SALHKSVRGS DPDAALYYLC RMLDAGEDPL FLARRVVRMA
VEDIGLADPQ ALVICNAAKD AYDFLGSPEG ELAIAQAVIY LATAPKSNAA YKAYKAAMRA
AKQGGSLLPP KHILNAPTKL MKSEDYGAGY QYDHDTPEGF SGQEYFPDAL GHQTFYDPPD
RGFEREIRKR LDYWAKLRNS KT
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