| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3339 |
|---|
| Symbol | |
|---|
| ID | 3973449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3696432 |
|---|
| End bp | 3697250 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637926450 |
|---|
| Product | 2,5-didehydrogluconate reductase |
|---|
| Protein accession | YP_533200 |
|---|
| Protein GI | 90424830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCG TTGAAGCCCA CGGCGCAAAG ATCCCGGTGC TCGGCCTTGG GACCTGGGAA
CTCAGCGGGC GGATCTGCTC GCGCGTTGTC GAGCAGGCGC TCCGGCTCGG CTATCGCCAC
ATCGACACCG CGCAGATCTA TGAGAACGAA CGCGAGGTCG GCGAAGGCCT GCGCGCCTCC
GGGGTCCGCC GCGACGACGT GTTTGTCACC ACCAAAGTCT GGACTACGCA TTTTGCGCCG
CACGATCTGT TGCGCTCGAC CAAGGACAGC CTGTCGAAGC TGCGGATGTC CGATGTCGAT
CTGTTACTGC TGCACTGGCC GAACTCGCAT GTGCCGCTGG CGGAGACGCT GGGTGGGCTC
GCCCGGGCCA AGGAACTCGG GTTGGCCCAG CACATCGGCG TGTCGAATTT CACCGTCGCT
TTGATCGAAC AGGCGGTCAC GCTTTGCACG CAGCCTTTGG TGTGCAATCA AGTCGAGTAT
CACCCCTATC TCGATCAGAC CAAGGTGATC AACGCCTGCC TCGATCACGG CATGGCCGTG
GTGGCCTACA GCCCGATCGC CAAGGGCCGC GCCAAGAACG CCGAGACGTT GATCCGGATC
GGCTCCGGCT ACGGCAAGAC CGCGGCGCAG GTTTGCCTGC GCTGGATCGT GCAACAGGAC
ATTGTGGCGA TCCCTCGCAC CTCGAAAATC GAACGGTTGT CGGAAAACAT CGGGGTTTTC
GATTTCGAAC TGAGCGAGGA GGAGATGCGC GAAATCTTTG CGATGGCGAG CCCCAAGGGA
CGGCTCACCA ATGTCGGCTT TGCGCCGAAA TGGGATTGA
|
|---|
| Protein sequence | MQFVEAHGAK IPVLGLGTWE LSGRICSRVV EQALRLGYRH IDTAQIYENE REVGEGLRAS
GVRRDDVFVT TKVWTTHFAP HDLLRSTKDS LSKLRMSDVD LLLLHWPNSH VPLAETLGGL
ARAKELGLAQ HIGVSNFTVA LIEQAVTLCT QPLVCNQVEY HPYLDQTKVI NACLDHGMAV
VAYSPIAKGR AKNAETLIRI GSGYGKTAAQ VCLRWIVQQD IVAIPRTSKI ERLSENIGVF
DFELSEEEMR EIFAMASPKG RLTNVGFAPK WD
|
|---|
| |