| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3332 |
|---|
| Symbol | panC |
|---|
| ID | 3973442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3691533 |
|---|
| End bp | 3692468 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637926443 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | YP_533193 |
|---|
| Protein GI | 90424823 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.475559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGT CACGCGGCAT TGGCAGTGCC GGGCCCAGGT TGTTAGAGTT GCCGTCCCGC
CGCCACTGCA CCGATCGAGT CGCAATGTCC CGTTCCCCTG TTATCGTCCG CACCCTGCCG
GCCCTGCGCC GCGCGCTGGA TACGCTTCGT GCCCGTAACG CCAGCCTGGC GTTGGTGCCC
ACCATGGGCG CGCTGCATGA CGGCCACGTC TCGCTGGTCC GGCTGGCGAA GCGGCGCGCC
AGCAAAGTTG CGGTGTCGAT CTTCATCAAC CCGGCGCAGT TCGCGCCGAA CGAGGACTTT
GCCGCCTACC CGCGGACCTG GAAGGCCGAT CTCGCCCGAC TCACCGCCGA GAAGGTCGAT
CTGATCTGGA ATCCGGATGC CAAGACGATG TATCCGGCCG GTTTCGCCAG CAAGATCCTC
ACCGAAGGCC CGGCGCTGGC CGGGCTCGAG GACCGCTTCA GGCCGCAATT CTTCGGCGGC
GTCACCACCG TGGTCGGCAA GCTGTTCGCC CAGGTCCGGC CGGATCTGGC GCTGTTCGGC
GAGAAGGATT TTCAGCAGTT GCGGGTAGTG GCGCGGATGG CGCGCGACCT CGATCTCGGC
GTCAAGGTGG TGGGCGCGCA GATCGTCCGC GAGCGCGACG GGCTCGCGAT GTCGTCGCGC
AACCGCTATC TGTCGCCGGA GCACCGCGAG AGCGCGACGG CGCTGTGCCG CGGCTTGAAG
GAGGCGGCGA AACGGATCCG GGCCGGCGAG GCCATCGAGG CAGCCCTGGC GGGCAGCGCC
GCGCTGATCA CCGCGGCCGG ATTCAAGATC GATTATCTCG AAGCCCGCCA CGCCGAGACG
CTGGCGCCGG TCGCCTCGCG CAAGGACGGC CCGATCCGGC TGCTGGTCGC CGCCACGATC
GGCACCACCC GGCTGATCGA CAACGTCGCG GTGTAG
|
|---|
| Protein sequence | MNPSRGIGSA GPRLLELPSR RHCTDRVAMS RSPVIVRTLP ALRRALDTLR ARNASLALVP
TMGALHDGHV SLVRLAKRRA SKVAVSIFIN PAQFAPNEDF AAYPRTWKAD LARLTAEKVD
LIWNPDAKTM YPAGFASKIL TEGPALAGLE DRFRPQFFGG VTTVVGKLFA QVRPDLALFG
EKDFQQLRVV ARMARDLDLG VKVVGAQIVR ERDGLAMSSR NRYLSPEHRE SATALCRGLK
EAAKRIRAGE AIEAALAGSA ALITAAGFKI DYLEARHAET LAPVASRKDG PIRLLVAATI
GTTRLIDNVA V
|
|---|
| |