Gene RPC_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3329 
Symbol 
ID3973439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3688699 
End bp3689436 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID637926440 
Productheat shock protein DnaJ-like 
Protein accessionYP_533190 
Protein GI90424820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCA TGCCTACGCT GATCGCCGGC GTCGTCGCCG TCATAGTGCT GTATTCGCTG 
TTGCAGATGT TCCGGGCCGC CAACCCGGCG GTGCTGGCGC GTGGCATCAA GATCGGCGGC
GGCGTGGTGA CGCTGGCGGT GGCGGCGTTC ACCGGCATCA AGGGCGAGTT GGCTGTGGCG
ATCCCGTTGG GGATCTTCGG CGCCGGGCTG CTCGGCTGGG CCCCATTCGG CAGCGGCGCC
TTCGGCAATC TCGGGACACT GTTCGGCTCG CGCGGAAAGC GCTCGGCCGG CCAGACCTCG
CGCGTGGTAT CGCAATACAT CGAGATGATG CTGGACCACG ACAGCGGGGC CTTGAGCGGC
CGGTTTCTGG CCGGGCCGCA GGCCGGCCGC GCGCTCGACG AGTTCGATCT GCCGCAACTG
GCGGCGATGA TCCCGGCGTT GGACGCCGAA AGCTGCGCGC TACTTGAAAG CTATCTTGAC
CGCCGGTTTC CCGCTTGGCG TCAGAACGCG CAGGGTGAGC GGGCAGGGGG GCAGAGCCGC
GAGACGTCGA GCGGCAAAAT GACGGACGAG GAGGCCTATC AGATCCTTGG CCTGAAGCCG
GGTGCGGGGC GAGCTGAAAT CGGGCAAGCC CACCGTACGC TCATGAAGAA ACTGCATCCC
GACCAAGGGG GGTCGACGTA CCTTGCCGCC CGCGTAAACG CGGCCAAGGA TACTTTGCTT
CGCACTCATC GCAGCTAA
 
Protein sequence
MEAMPTLIAG VVAVIVLYSL LQMFRAANPA VLARGIKIGG GVVTLAVAAF TGIKGELAVA 
IPLGIFGAGL LGWAPFGSGA FGNLGTLFGS RGKRSAGQTS RVVSQYIEMM LDHDSGALSG
RFLAGPQAGR ALDEFDLPQL AAMIPALDAE SCALLESYLD RRFPAWRQNA QGERAGGQSR
ETSSGKMTDE EAYQILGLKP GAGRAEIGQA HRTLMKKLHP DQGGSTYLAA RVNAAKDTLL
RTHRS