| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3326 |
|---|
| Symbol | |
|---|
| ID | 3973013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3684465 |
|---|
| End bp | 3685904 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637926437 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_533187 |
|---|
| Protein GI | 90424817 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTCG CCTCACCTTT CGGCTGGCTG CGCCGCACGG CCAAGGCTTT CCATGCAGCC
GACGACGGCA ACATCGCGGT GCTGTTCGGG ATCGCCGTCA TTCCCCTGAT CAGCTTCGTC
GGTGTCGCAG TGGATTACAG CCGGGCCACG GCGGCGCGTT CGGCCATGCA GGGGGCTGCG
GACTCCGCCA CGCTGATGGT GTCGAAGGAT TATGCGGCCG GCGTGATCAG GGCCAGCGAC
ATCCAGGCCA CCGCGGAAAA GTACTTCAAG GCGCTGTATA CCAGCCCGGG CATCAACAAT
GTCACCGTCA CGGCGACCTA CACGGCGAGA TCCGCCAACG GCAGCTCGAC GGTGGTGATG
AATACCTCGG GCAGTATGCC GACATCGTTC CTGAAAGTCG CCGGCTTCAC CGCGCTGCCG
TTCACAGCGA GTTCAACGTC GACCTGGGGC GCAACCCGGT TGCGCGTCGC GATGGCGCTC
GACGTCACCG GCTCGATGGA TTGGGATGAC AAACTGACGG CAATGAAGAC CGCGGCCATC
AAACTCGTGA ACACGCTTAA GGCGACCGCA TCCACCGACG CGGACGTCTA TATCTCTATC
ATTCCCTTCA ACGTCATGGT CAACGTCGGC ACCGCCAACA AGGACGCGGA GTGGCTCGAT
TGGGACACCG ATTACGGAAG TTGTAAATCG AACCGCACGA CCCAGAACAG CTGTCAGGCC
GCGGGCGAAA CTTGGTCCTG GTGGGCCAAT AGCTGTACAT CCAGATACAC TCGGAAAAGC
ACCTGCGTGG CAGGCGGAGA AACCTGGATC CCAAGCGGCG TCAGCAACTG GAAGGGATGC
GTCACCGACC GCACCACGTC GAACGATTAC GATGTGATCA AGACCCCTCC GACCACCGCG
ACACCGGCGA CGCTGTTCCT CGCGAAGAGC TATTCGGCCT GCCCGTTGTC GCTGCTGCCG
ATGAAAGCCG CCTACTCGTC CAACGAGTCG GATACTTCGA CCGCTGAATC GACGCTGAAG
GGCAAGATCA ACAAATTGGA CGCCGAGGGC AACACCAATC AGCCGATCGG TCTGTTCTGG
GCGTGGATGT CGCTGCAGAC TGGCGTGCCG CTCAATACGC CCGCTAAAGA TACGGAATAC
AAGTACACCG ACGCCATCAT CCTGCTGTCA GACGGGGACA ACACGCAAAG CGGCAACAGT
AATTCTGTCA GCGCGATCGA TGCCCGGCAA AAGAAACTGT GCGACAATAT CAAGGACCCC
TTGAACGGCA CGACGACGAT CTTCACCATC CAGGTCAACA CTGACGGCGA CGATGAGTCC
GCAGTTCTGA AATACTGCGC CAGTGACGGT CAGTTCTTTC AATCAACCAC CGCCGACCAG
ATCGAAATCG CGTTCCAGTC GATTGGCTCG TCGTTGACCA AGCTACGGCT GGCTCAATAA
|
|---|
| Protein sequence | MPLASPFGWL RRTAKAFHAA DDGNIAVLFG IAVIPLISFV GVAVDYSRAT AARSAMQGAA
DSATLMVSKD YAAGVIRASD IQATAEKYFK ALYTSPGINN VTVTATYTAR SANGSSTVVM
NTSGSMPTSF LKVAGFTALP FTASSTSTWG ATRLRVAMAL DVTGSMDWDD KLTAMKTAAI
KLVNTLKATA STDADVYISI IPFNVMVNVG TANKDAEWLD WDTDYGSCKS NRTTQNSCQA
AGETWSWWAN SCTSRYTRKS TCVAGGETWI PSGVSNWKGC VTDRTTSNDY DVIKTPPTTA
TPATLFLAKS YSACPLSLLP MKAAYSSNES DTSTAESTLK GKINKLDAEG NTNQPIGLFW
AWMSLQTGVP LNTPAKDTEY KYTDAIILLS DGDNTQSGNS NSVSAIDARQ KKLCDNIKDP
LNGTTTIFTI QVNTDGDDES AVLKYCASDG QFFQSTTADQ IEIAFQSIGS SLTKLRLAQ
|
|---|
| |