| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3287 |
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| Symbol | |
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| ID | 3971743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3636710 |
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| End bp | 3638989 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926398 |
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| Product | hypothetical protein |
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| Protein accession | YP_533148 |
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| Protein GI | 90424778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.253593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.538496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGT CGACGCCCGC CGCCGCCTCG GAACCGCTCG TCCAATCCCG CAACGGCTTG
ATTCTGGTGG TCTATACCGC GGCGATCTTC ACCAGCGCGC TGTTGCTTTT TTCGGTGCAG
CCGTTGTTCA CCAAAATGGT GTTGCCGCGG CTCGGCGGTT CGCCGGCGGT GTGGTCGGTG
GCGATGGTGT TCTTCCAATC GCTGCTGCTC GGCGGCTACG CCTATGCGCA CTACCTGATG
CGGCTGCGGA GCCGCACCAT TCCGGTGGTG GTGCATCTGT TGTTGCTGCT GGTGGCGTTT
CTCGGTCTGC CGCTGTCGAT CGCGGGCGGT TGGGGCACGC CGCCGTCCAG CGGCTACGCG
TTCTGGCTGC TCGCCTTGTT CGCGGTGTCG ATCGGGCTGC CGTTCTTCGC GCTCGCCGCC
AACAATCCGC TGCTGCAGGC CTGGTTCGTG CGCACCGGCC ATCCCGCCGG CCACGATCCG
TATTTCCTTT ATGCCTCGTC GAACATCGGC AGCTTCCTGG CGCTATTGTG CTATCCGCTG
CTGCTGGAGC CGATGCTGTC GCTGCACGTG CAGAATCTGG TTTGGACCGG CGGCTACGCG
GTGCTGATCA TGTTGATCCT GGGCTGCGGC TGGCTGCTGT TGCAGTCGCC CGCGGTGGCG
CTGCGCGACG AGGCCGAGGA TGTCGCCGCA CCGGCGCCCT CCTGGGCGCT GCGGGCGCGC
TGGATCTTTC TCGCCGCGGT GCCCTCCGGG CTGCTGATCG CCGTGACCGC GCATATCTCC
ACCGACGTCG CCGCGGCGCC GCTGTTATGG GTGCTGCCGC TGTCGCTGTA TCTGTTGACC
TGGGTGCTGG TGTTCCAGTC GCGGCCGTTG TTGCCGCACA AATGGATGCT GGCGCTGCAG
CCGGTCGCGA TCGCGGTGGT GCTGGTGCTG CTGGCCTATG GCGGCGAGCA GAACCTGCTG
CTGACGCTCG GCGGCCATCA ACTCTGCTTC TTCATCATCG CGATGGCCTG TCACGGCGAG
CTGGCGCGCA CCCGTCCGGC GGCGCGCCAT CTCACCGGGT TCTATGTGGC GCTGTCGTTC
GGCGGCATGG TCGGCGGCTT GTTCGCCGGG CTGCTGGCGC CTTACACATT CTCCTGGATC
GCCGAATATC CGATCCTGTT GGCACTGGCG GCGCTGTGCC GGCCGGCCCG CGTCGCGCCG
TCGCCGCGCT GGACCCGTTG GTATTGGCTG GCGCTCGCCG CGGTCGCGGT GGCGCTGCTG
GCGCCCGCGT TCGCCGGCGG CAAGCTGTTC GAATGGATCG AGACCAACCG GGTGGTGGTG
ATCGGCGACG TCGCCATGCT GGCGGTAATC GCCGCGCTGG TGCTGCGCGC CAACCGTTGG
AAGATCTTCG CCACGGTGGC GCTGGGGCTG GTGCTGCTGC GCGCCTATCC GCACGAGGAC
GGCCGGGTCG ACACGGTGCG CAGCTTCTTC GGCGTCCACA AGATCATGGT GACGGCGAAC
GGCCAGTATC ACGTGCTGAT GCACGGCACC ACGATCCACG GCGCGCAGAA AGTGCTGAAC
GACGACGGCT CGCCGGTCAC CGGACGGCCC GAGCCGATTT CCTATTACTA CAAGGACGGC
GGCATCGGGC AGGGCATCAG CGCGATCCGC GCCCGCAAAG GCGCCCCGCT GCGCGTCGCG
GTGATCGGGC TGGGCTCAGG CTCGTTGACC TGCGCCGCCG CGCCCGGCGA GGCCTGGAAG
TTCTTCGAGA TCGACCCGTC GATGGTCGAC ACCGCGCGCG ATCCGAAATA CTTCAGCTTC
GTGAAAAATT GCGCGCCGGA TCTTGCGCCG GTGATGGGCG ACGCCAGGCT GACCTTCGCG
CAGCAGCCGG ACGGGGTCTA CGACCTGATC ATCGTCGACG CCTATTCGTC GGATGCGATT
CCGATCCATC TGGCCACCCA AGAGGCGATG GCGATCTACA AGGCCAAGCT GGCGCCGCAG
GGCGCGGTGC TGATGCACGT CTCCAACCGG CATCTCGAAC TGGCCAGCGT GGTGGTCGGG
ATCGCCGACG CCAACGCGCT GAAGAGCTGG GTCTATTCGG AGGATTCCGG CCGCGACGCC
GAGTACATCT TCTCGACCTC GGTGGTGCTG TCGGCGGCGG CCGCCGCCGA TGTCGGTGCG
GTCGCCTCGT CGGACAAATG GGCGGCGACC CCGGCCGACA AAACCCAGCG GGTGTGGACC
GACGACTATT CCAACGTGCT CGGCGCGGTG TGGCGGCGGT TACGCGACGG CGAGCAGTGA
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| Protein sequence | MTSSTPAAAS EPLVQSRNGL ILVVYTAAIF TSALLLFSVQ PLFTKMVLPR LGGSPAVWSV
AMVFFQSLLL GGYAYAHYLM RLRSRTIPVV VHLLLLLVAF LGLPLSIAGG WGTPPSSGYA
FWLLALFAVS IGLPFFALAA NNPLLQAWFV RTGHPAGHDP YFLYASSNIG SFLALLCYPL
LLEPMLSLHV QNLVWTGGYA VLIMLILGCG WLLLQSPAVA LRDEAEDVAA PAPSWALRAR
WIFLAAVPSG LLIAVTAHIS TDVAAAPLLW VLPLSLYLLT WVLVFQSRPL LPHKWMLALQ
PVAIAVVLVL LAYGGEQNLL LTLGGHQLCF FIIAMACHGE LARTRPAARH LTGFYVALSF
GGMVGGLFAG LLAPYTFSWI AEYPILLALA ALCRPARVAP SPRWTRWYWL ALAAVAVALL
APAFAGGKLF EWIETNRVVV IGDVAMLAVI AALVLRANRW KIFATVALGL VLLRAYPHED
GRVDTVRSFF GVHKIMVTAN GQYHVLMHGT TIHGAQKVLN DDGSPVTGRP EPISYYYKDG
GIGQGISAIR ARKGAPLRVA VIGLGSGSLT CAAAPGEAWK FFEIDPSMVD TARDPKYFSF
VKNCAPDLAP VMGDARLTFA QQPDGVYDLI IVDAYSSDAI PIHLATQEAM AIYKAKLAPQ
GAVLMHVSNR HLELASVVVG IADANALKSW VYSEDSGRDA EYIFSTSVVL SAAAAADVGA
VASSDKWAAT PADKTQRVWT DDYSNVLGAV WRRLRDGEQ
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