| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3279 |
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| Symbol | |
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| ID | 3971735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3629457 |
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| End bp | 3632057 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926390 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_533140 |
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| Protein GI | 90424770 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CGACCAATAA ACGCCTCGCC AACGACCTGC CCGGCTACCA GCCCGCCGCG
GGCGGCATCG CCGCGCGGGC TCGCGCCCAG GCGATGCCGG CCTATCTCGC CGGCCTCAAT
CCCGAGCAGA GCGACGCGGT GCAGACGCTG GACGGCCCGG TGCTGGTGCT GGCCGGCGCC
GGCACCGGCA AGACCCGGGT GCTGACCTCG CGGATCGCCC ATATCCTGTC CTCGGGCCGC
GCCCGCCCCG GCGAAATCCT CTCGGTGACC TTCACCAACA AGGCCGCGCG CGAGATGAAG
CTACGGCTGG GGCAAATGCT CGGCCAAGCC GTCGAGGGCA TGCCGTGGCT CGGCACCTTC
CATTCGATCG GCGGCCGCAT CCTGCGCTAT CACGCCGAGC TGGTGCAGCT GACCTCCAAC
TTCACCGTGC TCGACACCGA CGACCAGATC CGGCTGTTGA AGCAATTGCT CGCCGCCGAC
AATATCGACG ACAAGCGCTG GCCGGCGCGG ATGCTGGCCG GCTTGATCGA CGGCTGGAAA
AATCGCGGGC TGACGCCGTC GCAGGTGCCG GCCGGCGAAG CCGCGGTGTT CGGCAACGGC
CGCGGCGGCA AGCTCTACGC CGCCTATCAG GAGCGGCTGA AGGTGCTGAA CGCGGCGGAT
TTCGGCGATC TGTTGCTGGA GGACATCCGG CTGTTCCGCG AACATCCCGA CGTGCTGCGG
CAGTATCAGC AACGCTTCAA GTACATCCTG GTCGACGAAT ATCAGGACAC CAACGTCGCG
CAATATCTCT GGCTGCGGCT GCTGGCGCAG GCGCCGTCGT CGCCAAAGAA TTCCTCCATC
CTTCGAGACG CCGCGCTGCG CGCGGCTCCT CAGCATGACG GTGCAGAGAC TATCGCCAGC
GCAGGCACTG ACTTAGTCCC TCACCCTGAG GAGCGCGGGC AAGGCCCGCG CGTCTCGAAG
GGCGAGGCCG AGCCGCCCGC CGCATCCTCG CCGCCGAAAA ACATCTGCTG CGTCGGCGAC
GACGATCAGT CGATCTACGG CTGGCGCGGC GCCGAGGTCG ACAACATCCT GCGCTTCGAC
CACGACTTCC CCGGCGCGAA AATCATCCGG CTGGAGCGCA ATTATCGCTC CACCGGCCAC
ATCCTCGCCG CCGCCTCGCA TCTGATCGCG CACAATGAAG GCCGGCTCGG CAAGACGCTG
CGCACCGAGG ACGTCGACGG CGAGAAGGTC ACCGTCACCG GCTCGTGGGA TTCCGAAGAG
GAAGCCCGCG CGATCGGCGA AGAGATCGAG CAGCTGCAGC GCGACGGCCA CAAGCTCAAC
GACATTGCGA TCTTGGTGCG CGCCTCGTTC CAGATGCGCG AATTCGAAGA TCGTTTCGTC
ACGCTCGGCC TGCCCTACCG GGTGATCGGC GGCCCGCGGT TCTACGAGCG CGCCGAAATC
CGCGACGCAC TGGCTTACTT GCGGGTGATC AATTCGCCGG CCGACGACCT CGCCTTCGAG
CGCATCGTCA ACGTGCCGAA GCGCGGGCTC GGCGACGCCA CCGTGCAGCT GCTGCACGAC
CATGCCAGGA AGCGCAAGAT CCCGTTGACC GAAGCCGCGC GCGCGATCGT CGACAGCGAC
GAATTGAAAC CGAAGGCCCG CGGCAGCCTG CGCGAGCTGA TGACCTCGTT CGAGCGCTGG
CGGATGCAGC GCGAGGTGAA GACGCATACC GAACTCGCCG AGATCGTGCT CGACGAGAGC
GGCTACACCG AGATGTGGCA GAAGGACCGC TCCGCCGACG CCGCCGGCCG GCTGGAGAAC
TTGAAGGAAT TGGTCCGCTC GATGGAAGAG TTCGAGAACC TGCAGGGCTT TCTCGAACAT
ATCTCGCTGG TGATGGACCG CGAGGGCGGC GCCGACGACG ACGCGGTGAG CGTGATGACG
TTGCATTCCG CCAAGGGCTT GGAATTCGAC AGCGTGTTTC TGCCGGGCTG GGAAGAAGGG
CTGTTTCCGC ATCAGCGCGC GCTCGACGAA CAGGGCCGCG CCGGGCTCGA GGAAGAGCGC
CGCCTCGCCC ATGTCGGCAT CACCCGCGCC CGCAAGCGGG CCAAGTTGTA CTTCGCCTCC
AACCGGCGGA TTCACGGCAC CTGGAACACG ACGCTGCCGT CGCGCTTTCT CGACGAACTG
CCGGCCGATC ATGTCGAGAT CACCGAATCC AAGGGCGGCT CCGGCTGGGG CGGCGCCGGC
GGCTACGGCT CGTCGCGGTT CGACAATATG GAATCCTTCG GCTCGAGCTA CACCACGCCG
GGCTGGCAGC GCGCCCAGGC CAACCGTGCC AAGAACAGCC GCGGCGGCGG AAGTAACGGC
TTCAGCGAAG AGCAGTCGCC GTTCTCGTCG TCACGCGGCG AGTCGGATCA TTTCGCCAAG
AAGCGCGCGC CGCTGACCAT CGAGGGCGAG TTGGTGGCGA AATCCACTGG TGCGGCGTCG
GACTATGCGC TGAAGGACCG GGTGTTTCAC CAGAAGTTCG GCTACGGCCA GGTGGTGCGG
GTCGACGGCA ACAAACTCAC CATCGCCTTC GACAAGGCCG GCGAAAAGAA GGTGGTCGAT
AGTTTCGTGG AGCGGGTGTA G
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| Protein sequence | MTDPTNKRLA NDLPGYQPAA GGIAARARAQ AMPAYLAGLN PEQSDAVQTL DGPVLVLAGA
GTGKTRVLTS RIAHILSSGR ARPGEILSVT FTNKAAREMK LRLGQMLGQA VEGMPWLGTF
HSIGGRILRY HAELVQLTSN FTVLDTDDQI RLLKQLLAAD NIDDKRWPAR MLAGLIDGWK
NRGLTPSQVP AGEAAVFGNG RGGKLYAAYQ ERLKVLNAAD FGDLLLEDIR LFREHPDVLR
QYQQRFKYIL VDEYQDTNVA QYLWLRLLAQ APSSPKNSSI LRDAALRAAP QHDGAETIAS
AGTDLVPHPE ERGQGPRVSK GEAEPPAASS PPKNICCVGD DDQSIYGWRG AEVDNILRFD
HDFPGAKIIR LERNYRSTGH ILAAASHLIA HNEGRLGKTL RTEDVDGEKV TVTGSWDSEE
EARAIGEEIE QLQRDGHKLN DIAILVRASF QMREFEDRFV TLGLPYRVIG GPRFYERAEI
RDALAYLRVI NSPADDLAFE RIVNVPKRGL GDATVQLLHD HARKRKIPLT EAARAIVDSD
ELKPKARGSL RELMTSFERW RMQREVKTHT ELAEIVLDES GYTEMWQKDR SADAAGRLEN
LKELVRSMEE FENLQGFLEH ISLVMDREGG ADDDAVSVMT LHSAKGLEFD SVFLPGWEEG
LFPHQRALDE QGRAGLEEER RLAHVGITRA RKRAKLYFAS NRRIHGTWNT TLPSRFLDEL
PADHVEITES KGGSGWGGAG GYGSSRFDNM ESFGSSYTTP GWQRAQANRA KNSRGGGSNG
FSEEQSPFSS SRGESDHFAK KRAPLTIEGE LVAKSTGAAS DYALKDRVFH QKFGYGQVVR
VDGNKLTIAF DKAGEKKVVD SFVERV
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