| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3274 |
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| Symbol | |
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| ID | 3971730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3621490 |
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| End bp | 3625209 |
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| Gene Length | 3720 bp |
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| Protein Length | 1239 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637926385 |
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| Product | AsmA |
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| Protein accession | YP_533135 |
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| Protein GI | 90424765 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.564175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGACGA CGCTACTCGG CTTGGCAATG GCTCTGATCA TTGCGCTGAT CGCCGCACTG
GTCGGGCCGT TGTTCATCGA TTGGAACCAG TTCCGCCCGC GGTTCGAGGC CGAGGCAGCG
CGCGTCGTCG GCGCGCCGGT GCGGGTCGCC GGCGCGCTCG ACGCGCGGCT GTTGCCGACG
CCGACGCTGC GGCTGCGCTC GGTGGTGGTC GGCAAGGCCG GCGCGCTGGG CCAGGAGAAA
GGTCTGGTGC GGGCCGACAA GCTCGACGTC GAGTTCAGCC TCGGCGCGCT GATGCGCGGC
GAAGTCCGCG CCACCGAACT CACCGTCGGC GGCCTGGCGC TCGATCTCGC CCTCGATCCG
CAGGGCCGGC TGGACTGGCC GGCAGCCTCC GCCTTTGCCA GTCTCGGCGC GCTGTCGATC
GACCGGCTGA ATCTCACCGG CCGGATCGTG CTGCATGATG CCGCGAGCCA TCGGACGCTC
GAACTGAACG ACATCGCCTT CAGCGGCGAG GTCCGCGGCG CCGCCGGATC GCTGCGCGGC
GACGGCAATT TCATGCTGGC CGGCGAGCGT ATGCCGTTCC GGTTGTCGGC GGGGCGGCCG
GTGCAGGGCA GCGGCACGCG GCTGCATCTG ACGCTGGAGT CGAGCGCGCG CGCGGCGTCG
TTGGATCTCG AGGGTTTGCT CAACGTCGAG GCCCGCGTCC CGCAATTCGA CGGCGTGGTG
ACGCTCGCCT CCGCCGCAGC GATGGCCGCG GCAAATGCCG ACGCCGCGGC GCCGATGCCG
TGGCGGCTCG CCGCAAAGCT GAAGGCGGAT CCCGCCGCCG CGCGGTTCGA TCAGCTCGAG
GCATCGTATG GTGCCGAGGC TGCGGCGCTG CGGCTGGCCG GATCGGCCGA GCTGCGGCTT
GGCGCCTCGC CGCAGCTGCA TGTCGCGCTG TCGGCGCGGC AGCTCGATGC CGACCGCCTG
CTCGGACAGC CAAGCGACGC CGCGACGCCG GCGCGCTGGC TGCAGGGTTT GCCGGATCGG
TTGGCGGCAA TGCCCAAGGC GGGGATTGCC ACGCGGCTCG AGATCGGCGT CGAGCAGGCC
ATGTTCGGCG GGCGCGCGGT GCAGAATCTC GCCGCGGATC TGCACAGCGA CGCGCAGAAC
TGGATTGTCG ATCGGCTCGG ATTCCGCGCG CCGGGCGGGA CCCAAACGAT GATCAGCAAC
GGTCTGATCC AGCCGGGCGC GACGGATAGC CTGCGGGCCA GCCTGGCCGT CGACTCCGCC
GATCCTGATC TGTTGGCGGC GTGGCTGACC GGCCGCGCCG AGATCGGCGG CCGCGCGCAG
AAGCCGTTCC GACTCAATGG CGAGGTCAGC GCCGGCGCTG GCGGCTTTGC GATCGAGGCC
GTCAAGGCCG AGCTCGACGG CGGCCGCGTC GCCGGGCGGT TGGCGCTGTC GCGACAGGCC
GGCGGATCAC GTCTTGACGC GGCGCTGAAG GCTGAGCGGC TCGATCTCGA CGCTGCCGGC
GCGTTGCTGC GGGCGCTCGC CGGGCCGCAG GCCGCATGGC CCGACGCTGC CAAGCTGCAG
CTGGAGGTCG CCGAGGCGAC ATGGGCGGGA CAAGCGTTGA AGCCGTTGCT GGCGCAGCTC
GGTTATGGTC CGGACGGCGT GACGCTCGAT CGGCTGCGGA TCGGCGACGC TAACAGCGTG
CTGATCGAGA GCGCCGGCGC GCTCGACCGC CAGGCCGGCA CCGGCAAGCT CACGGTCGAC
GCCACCGCCG CCACGCTCGG CCGGATCGCC GAACTGATCG CGCCGCTGGC GCCGGTCGCA
GCCGCACGGC TCGACGCCAG CGGTGTCGAA GCCGGCCCGG CGCATTTGAC GTTGGCCGTA
GCGCTCGACC CGCGCGGCGC CGCGACCGAT CGTGGCGCGG CACGGGCGAC GCTCGAACTC
GACGCCCCGC AGCTCAAGGG CCGGGCGAGC TTCACCGCGA GCCCGCTGTT GACGGCGATC
CGCAGCGGCG ATGTCGAGGC GTTGCGGGCC AGCGACGTCA AAATCGAAAG CAACCTATCG
TCGGAGCGCG GCGCGCCGCT GTTGGTCGTG CTCGGTCTGG ATGGGCTGAT CGCCGCGGGT
CCCGGCGCGG CGCGGCTTGA GGCCTCGGCA ACCGGAAGCT GGCGCGCGCC GCTCAAGGTC
AGCGCCAGGC TGCAAGGCGC CGAGCTCGAC GCCGAACTGA AAGGCTCCGG CGATCCCTGG
GCCGCCGAGC CGAATGCCAC CCTGGACTTG GCCATCCGCC GCGCCAATAT CGCGCCGCTG
CTGGCGCGCA ACGGCGCCGA TGCCGCCGCT GCATCCGCCA GCCTGACCTC GCGGCTGGTG
ATCGCGGGCC AGAAACTCGG CTTCGACGAC ATCGACGGCG CCGTCGCCGG ATCGCGGCTG
CGCGGCCGCT TGGCGCTGAC CATGGGCGAT CAGATCGGCG TCGACGGCGC GATCGGGCTG
GATTCGCTGG AGCTTGCGCC GGTGCTGAGG CTGGCGCTCG GCGCCGCCGG CAAGGATCAG
ACCGCACCGC TCGGCCGCGG AGCGCTGCAA GGCTGGCGCG GGCAACTGGC CTTCGAGGCG
TTGCGCGGGG TGGTGCCGGG CGGGATCGAA CTACGGCCGG TCAGCGGATT GCTTCGCAGC
GATGGCGGTT CGCTGATCAT CGACAAGCTC ACCGGCAAGA TCGGCGGCGG CGACGCTGTC
GGCGATATCG CGGTGAGGCG GTCGGCGGAC GGCGTCGCGC TGGATGCCCG GCTCAAATGG
TCCGGCGTCG ATGGCGCCGC GCTGCGCTAT CGGGCGCTGG CGATGCCGGC CGGCAAGACG
TCGCTGCAAA TGACGCTATC GAGCCAGGGC CGCAGCGGCT CGGCCCTGGC CTCAGCCTTG
ACCGGCAGCG GATTGCTGAC GATCGATACC GCGCGGATCG CCGGGCTTGA TGCCGGCGTG
TTCGTACGGG TGATCGCCGC CGGCCAGTCC GGCGCGGCGG TCGACGAGGA CAGGCTGCTG
CAGATCGTCG ATCCATTGCT GGCGCGAGGC ACCCTCGCGG TGGCGCGCGC GCAGATTCCT
TTCAGCATCG AGGAGGGCCG CTGGCGCGTC AGCCCGACGA CGCTGGACGG CGACGGCGTG
CGGTTGGTGG TGTCGGGAGG CTATGACGGG ATCGCCGATC AGGCTGACCT TCGCGCCAGC
CTGACCTCGA CGGCGACCTC GGCCGAGCCG CGGCCGCCGG AAATCCTGAT CTTTGCCGCC
GGTTCGCCCG ACGGCCTGAC CCGAAGCGTT GACGTTGCCG GGCTGTCGTC GTGGTTGGCG
GGACGGCGGA TCGATGCCGA AACCCGCCGG CTGCAGGCCA TCGAACGCGA AGAGGTGCCG
GCGATCGCCA CCCCGGCCTC GATTCCGCCG GTTGCGCCGC CGAGCCCCGC AGCGGAGTCG
CCTCCGCCCG GAGATTCCCC CTCGGGTGGC CAGGCGACCG ACCTTCCGGT TGCCAGCGTG
CCGATGCCGG AACGCGACCC CCGCGACGCC GCGCCGAAAC CAAAGCTAAA TGCTGTGCGC
CCGCCGGTTC GGCCGGCAAC GCCTTCGGTG ATCGCTGGAC CTCAAGTCAA CAGCGAACGC
GCCACGCCGC TGCCGCCGCC GATCAATGTA CGGCCAGCAC CCGGCGATGG GCGACCAAGG
CTGCGCCCGC CTTTGCAACT GACCCCGCCG GCCGCGCTGC CGGCCCGACC GGCGTTCTGA
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| Protein sequence | MQTTLLGLAM ALIIALIAAL VGPLFIDWNQ FRPRFEAEAA RVVGAPVRVA GALDARLLPT
PTLRLRSVVV GKAGALGQEK GLVRADKLDV EFSLGALMRG EVRATELTVG GLALDLALDP
QGRLDWPAAS AFASLGALSI DRLNLTGRIV LHDAASHRTL ELNDIAFSGE VRGAAGSLRG
DGNFMLAGER MPFRLSAGRP VQGSGTRLHL TLESSARAAS LDLEGLLNVE ARVPQFDGVV
TLASAAAMAA ANADAAAPMP WRLAAKLKAD PAAARFDQLE ASYGAEAAAL RLAGSAELRL
GASPQLHVAL SARQLDADRL LGQPSDAATP ARWLQGLPDR LAAMPKAGIA TRLEIGVEQA
MFGGRAVQNL AADLHSDAQN WIVDRLGFRA PGGTQTMISN GLIQPGATDS LRASLAVDSA
DPDLLAAWLT GRAEIGGRAQ KPFRLNGEVS AGAGGFAIEA VKAELDGGRV AGRLALSRQA
GGSRLDAALK AERLDLDAAG ALLRALAGPQ AAWPDAAKLQ LEVAEATWAG QALKPLLAQL
GYGPDGVTLD RLRIGDANSV LIESAGALDR QAGTGKLTVD ATAATLGRIA ELIAPLAPVA
AARLDASGVE AGPAHLTLAV ALDPRGAATD RGAARATLEL DAPQLKGRAS FTASPLLTAI
RSGDVEALRA SDVKIESNLS SERGAPLLVV LGLDGLIAAG PGAARLEASA TGSWRAPLKV
SARLQGAELD AELKGSGDPW AAEPNATLDL AIRRANIAPL LARNGADAAA ASASLTSRLV
IAGQKLGFDD IDGAVAGSRL RGRLALTMGD QIGVDGAIGL DSLELAPVLR LALGAAGKDQ
TAPLGRGALQ GWRGQLAFEA LRGVVPGGIE LRPVSGLLRS DGGSLIIDKL TGKIGGGDAV
GDIAVRRSAD GVALDARLKW SGVDGAALRY RALAMPAGKT SLQMTLSSQG RSGSALASAL
TGSGLLTIDT ARIAGLDAGV FVRVIAAGQS GAAVDEDRLL QIVDPLLARG TLAVARAQIP
FSIEEGRWRV SPTTLDGDGV RLVVSGGYDG IADQADLRAS LTSTATSAEP RPPEILIFAA
GSPDGLTRSV DVAGLSSWLA GRRIDAETRR LQAIEREEVP AIATPASIPP VAPPSPAAES
PPPGDSPSGG QATDLPVASV PMPERDPRDA APKPKLNAVR PPVRPATPSV IAGPQVNSER
ATPLPPPINV RPAPGDGRPR LRPPLQLTPP AALPARPAF
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