Gene RPC_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3270 
Symbol 
ID3971726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3618722 
End bp3619240 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID637926381 
Producthypothetical protein 
Protein accessionYP_533131 
Protein GI90424761 
COG category[S] Function unknown 
COG ID[COG3814] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.128357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.822043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG ACCTTATCCG ATACGATGTC CTTGCCCGCG ACGCGCTGCG TGGCGTGTTG 
CGCCAGGTGC TGACGGACGC CGCGGAGCAT GGCCTGCCGG GTGAGCACCA TTTCTTCATC
ACCTTCCTGT CCACCGCCGA AGGCGTCAAA CTGTCGCCGC GGCTGTTGGT GCAATATCCG
CAGGAAATGA CCGTCATCCT GCAGCATCAG TTCTGGGACC TGGTGGTGAC CGAGGATCGC
TTCGAAGTCG GCCTGTCGTT CGGCGGCATC CCCGAGCGTC TGGTGGTGCC GTTCGCGTCG
ATCAAGAGCT TCTTCGATCC GTCGGTGGAA TTCGGCCTGC AATTCGAGCC GTCTTTGCCC
GGCGAGGTGC CGGCGGCAAA CCAGCCCGCG GCCTCGGTTC CGGCCAGCCC GGCGGTGCCG
CGCGACGACG CGCCGGCCGC GTCCGAGACC CCGGCCGAGC AACCGAAGCC CAGCGAGGGC
GCCGAAGTGG TCCGGCTCGA CCGCTTCCGC AAGAAATAG
 
Protein sequence
MATDLIRYDV LARDALRGVL RQVLTDAAEH GLPGEHHFFI TFLSTAEGVK LSPRLLVQYP 
QEMTVILQHQ FWDLVVTEDR FEVGLSFGGI PERLVVPFAS IKSFFDPSVE FGLQFEPSLP
GEVPAANQPA ASVPASPAVP RDDAPAASET PAEQPKPSEG AEVVRLDRFR KK