Gene RPC_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3249 
Symbol 
ID3971915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3598774 
End bp3599646 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID637926360 
Producthypothetical protein 
Protein accessionYP_533110 
Protein GI90424740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.538989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.94029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA CCGACATCGC CCTGGCGCTC ACCATCGCGC TGATCTGGGG GCTGGGATTC 
GTCTTCACCC GGCTCGGAGT GGCGGAGATG TCGCCGACCG TGCTGACGCT GGTGCGCTTC
GCGGTGGCGG CGCTGCCCTG CATCCTGCTG CCGCGGCCGA AGCTGGCCTG GCCGATCTGG
ATCGGCATCA GCCTGTTGCT GGTCTGGCAA TATCTGACCC AGACCTACGG CATGGCGCAG
GGCGTCCCGG CCGGGCTCAC CGCGGTGATC GTGCAGAGCC AGGCTCTGTT CACCATCGGC
TTTGCGGCGC TGCTGCTGCG CGAATTCCCC ACCCGCGGCC AGCTCGCCGG CATCGTGGTG
GCGAGTTGCG GGCTGTTGCT GATCTGCTTC ACCGTCGGTT ACGATTTCAG CGTGCTCGCC
TTCGCGGTGA CGATGACCGC GCCGCTGGCG TTCGCGCTGT CCAACCTGCT GCTGCGGCAG
GCCAGGGAGG TGCCGATGCT CGACCTGTTC GCTTGGGTCA GTCTGGCCTC GCTGCCGCCG
CTCGGGGCCG CCGCACTGGT CGCCGACGGT CCCGCTGCGA TCTGGCAGCA GGTCAGCCAT
CTGTCGCCGG GCGGAATCGG CTGCGTGCTG GCGCTGTCGC TGGGCTCGAC CACGCTCGGC
TACTGGATCT GGGGCCGGCT GCTGCACGCC TATACCGCGG CGCAGGTGGT GCCGTTTGCG
CTGTTGGTGC CGTTCATCGG CGCCGGCGCC TCGGCGCTGG TGTTCGGTGA GCAGTTCGGC
ACGCTGCGGC TGGCCGGGAT GATCATCGTG GTCGGCGGCA TCGCCATCAT GCTGTTTGCT
GGCCGGTCCA AGGCGTTGCC GGAGGTGGCG TGA
 
Protein sequence
MKLTDIALAL TIALIWGLGF VFTRLGVAEM SPTVLTLVRF AVAALPCILL PRPKLAWPIW 
IGISLLLVWQ YLTQTYGMAQ GVPAGLTAVI VQSQALFTIG FAALLLREFP TRGQLAGIVV
ASCGLLLICF TVGYDFSVLA FAVTMTAPLA FALSNLLLRQ AREVPMLDLF AWVSLASLPP
LGAAALVADG PAAIWQQVSH LSPGGIGCVL ALSLGSTTLG YWIWGRLLHA YTAAQVVPFA
LLVPFIGAGA SALVFGEQFG TLRLAGMIIV VGGIAIMLFA GRSKALPEVA