| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3246 |
|---|
| Symbol | |
|---|
| ID | 3971912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3594302 |
|---|
| End bp | 3596008 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637926357 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_533107 |
|---|
| Protein GI | 90424737 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.320036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGC CGCCCAATCC AGTGCCATCG GTGGGCGCGG CGACCGCAGC CGCGCCGGCC
AGCGTCTGGC GGATGCTGGC GGTGGTGCCG CCGCATCTCG CGGCATTGGC GTTGATGCTG
CACACCGAAA CCGATTTCAA CGGCCGGCTC GGCTTCCTGC TGGCCTGGGG GCTGCTGAAT
TTCGCCTGGA TCGCGGCGCT GCGCCGGCCG GCACTGTCCG GCGCGTTGTC GCTGACCATG
GTGGTGATGC TGGTGTTGCT GTCGCGGCTG AAGCACGACA TCGTGCAGAT GACCGCGAAC
TTCGTCGACC TGATGGTGAT CGACCGCGAC ACCATCGCCT TCCTGTTCAC GATCTTTCCC
GAGCTGCGCT GGTCGGTGAT CGGCACCGCG CTGCTGATCG TTCCCTTGAT GTACGCGCTG
TGGTGGCTCG ACCCGTTCCG GATCCGCCGC CAGCCGGCGC TGGCCGGCAC CATGCTGTTT
CTGGCCGGTC TGGTCGGCTA TGCGACGGCC TGGCCGGACG AGGCCTGGCG CGGCTATTAC
GACGACGGCT ACCTGTCGAA ATTCGCCCGC TCCGGGGTTA CCGCGGTGTC GGATTTCTTC
AACTACGGCT TCATGGAATC CGATGCGGTG GTCGCCGACC AGTTGAAGCT GCCGCTGGAG
GAGGCCTGCC ATCCGGTCGG GCGGCGGCCG AACATCATCA TGATCCACGA CGAGTCGTCG
TTCGACATTC GCGCCGCCGG GCAGGTGAAG GTGCCGGCGG GTTACGGCGC GCATTTCCAA
TCGTTCGACG GCAAGGCGCG CAAATTTCTC GCCGAGAGCA ATGGCGGGCC GAGCTGGTTC
ACCGAATACA ACGTGCTGGC CGGGCTGTCG TCGCGCTCGT TCGGGCGGTT TTCCTATTTC
GTCACCCGGA TCGCCTCCGG CCGGGTGGAG CGCGGCCTGC CGCTAGCGCT GCGCCGCTGC
GGCTACACCA CGACGGCGCT GTATCCCGCC AACGGCGCCT TCATGAGCGC GCGCAATTTC
CAGACCACCA CCGGCATGGA GCGGTTCTTC GACGCCCGTG ATCTCGGCTC CAGCCATGTC
GAGCCGGACA GCTTCTTCTA CGACAAGGCG CTCGGCTTGA TGCCGCAGCA CGGCGCGCCA
AAGCCGTTCT TCATGTTCGT CTATCTCGCC GCCAATCATT TCCCCTGGCA GACCAAATTC
CGCCCCGAGC TGACGCCTTC CTGGCGCGCG CTCGGCAACG CCCCGGTGGT CGAGGAATAT
CTGCGCCGCC AGGCCTTGAG CGTGACCGAC TACGCAGCCT TCCTGGCCGG CTTGAAGAAA
CACTATCCGG CGCAGCCGTT CCTGATCGTG CGGTTCGGCG ATCATCAGCC GGAATTCTCG
CCGCAACTGC TCGACCCCGA GCTCGACGAG GCCGGCCTCG GCAAGAAGCT GATGGCCTAT
GACCCGCGCT ACTACGCCAC CTACTACGCG ATCGACGCGA TCAACTTTCA GCCGGTGGAG
AGCCCGGCGA TCATGGACAC GATCGATGCC GCCTATCTGC CGCTGGTGAT CCAGGAGGCG
GCGGGGCTGC CGCTCGACCC CTCCTTTGCC GAGCAGAAGG CCATCATGCT CCGCTGCAGC
GGGCTGTTCT ACGGCTGCCG CAACGGCGCC GAGGCGCGGC GCTTCAACCG GCTGCTGATC
GACGCCGGCA TGATCAAGAA TCTGTAA
|
|---|
| Protein sequence | MGLPPNPVPS VGAATAAAPA SVWRMLAVVP PHLAALALML HTETDFNGRL GFLLAWGLLN
FAWIAALRRP ALSGALSLTM VVMLVLLSRL KHDIVQMTAN FVDLMVIDRD TIAFLFTIFP
ELRWSVIGTA LLIVPLMYAL WWLDPFRIRR QPALAGTMLF LAGLVGYATA WPDEAWRGYY
DDGYLSKFAR SGVTAVSDFF NYGFMESDAV VADQLKLPLE EACHPVGRRP NIIMIHDESS
FDIRAAGQVK VPAGYGAHFQ SFDGKARKFL AESNGGPSWF TEYNVLAGLS SRSFGRFSYF
VTRIASGRVE RGLPLALRRC GYTTTALYPA NGAFMSARNF QTTTGMERFF DARDLGSSHV
EPDSFFYDKA LGLMPQHGAP KPFFMFVYLA ANHFPWQTKF RPELTPSWRA LGNAPVVEEY
LRRQALSVTD YAAFLAGLKK HYPAQPFLIV RFGDHQPEFS PQLLDPELDE AGLGKKLMAY
DPRYYATYYA IDAINFQPVE SPAIMDTIDA AYLPLVIQEA AGLPLDPSFA EQKAIMLRCS
GLFYGCRNGA EARRFNRLLI DAGMIKNL
|
|---|
| |