| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3210 |
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| Symbol | |
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| ID | 3972008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3555418 |
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| End bp | 3557181 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926320 |
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| Product | ABC transporter related |
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| Protein accession | YP_533071 |
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| Protein GI | 90424701 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.461099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.871675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGC TCTCAGGATA TGCCCATCGT CCATTCGCCT TTGTGGGGCG CTATCTTCGG
CAACGTCCAA CGGCGCACGC GGTCATCCTG CTCGCCGTCG TGGCCGCGGT CGCCTGCTCG
GTGGGCACAC AATATGGCGT CAAATATCTG GTCGACGGGC TGTCGAGCGG TCCGGCGAAT
GGCGGCCATG TCTGGATGGC GCTCGGGTTC CTGGTGTCGC TGATCGCCGC CGACAACGTC
CTGTGGCGGA TCGCCAGCTG GACGGCGAGC TTCACCTTCG TCGGCGTCAC CGGCGATCTG
CGACGTGACA TCTTCCGCCA TCTCACCGGC CATGCGCCGA GCTATTTCTC CGATCGGCTG
CCGGGCATGC TGACCAGCCG CATCACCGCG ACGTCGAATG CGGTGTTCAC CGTCGAGAAC
ATGTTGGTCT GGAACGTGCT GCCGCCATGC ATCGCCACGG TGGCGGCGAT CGCGCTGATC
GGCACCGTGA GCCTGCCGAT GGCTGCGGGC CTGACACTGG TCTCGGCATT GGTGGTGATC
GGGGTGTTTC ACCTTGCCGC CGCCGGCAAG CCGCTGCATG ACGACTTCGC CGACAAGGCC
GCGGCGGTCG ACGGCGAGAT GGTCGACGTC ATCAATAACA TGCCGCTGGT CCGGGCGTTC
TGCGGGCTCG GCTACGAGCA CGCTCGGTTC GATGCCACCG TCAATCGCGA ATTGACCGCG
CGCGGTCGCA GCCTTCGCTA TCTCGAGCGG CTGCGGCTGT TGCACGCCTT GGTCACCGTC
ACCTTGACCG TGGCGTTGTT GGCCTGGGCG GTGATGTTGT GGCAGCAAGG CCGTGCCACC
ACCGGCGACG TGGTGCTGGT CTGCACCCTC GGGCTGTCGA TCCTGCACGC CACCCGCGAT
CTCGCGGTGG CGTTGGTCGA CATCACCCAG CACGTGGCGC GGCTGTCCGA GGCGCTGGCC
ACATTGCTGG TTCCGCACGA ACTCGCCGAT CACCCCGCGG CCGAGCCGCT GGTGCGCTCC
GGCGCGGCGA TCGCGTTCGA GGATATCAAG TTCCGCTATC CCGGCGGCCA AAAGCTGTTC
GAAGGATTGA CGTTGCGGAT CGGCGCCGGC CAACGCGTCG GACTGGTCGG CCAATCCGGC
GGCGGCAAAT CCAGCCTATT CGTGCTGCTG CAGCGGTTTT ACGACCCGCA GGCCGGCCGC
ATCACTATCG ACGGTCAGGA CATTACCCGC GTCACCCAAC AGAGCCTGCG CGAAGCCATC
TCGGTGGTTC CACAGGACAT CTCGCTGTTC CACCGCTCGA TGCTGGAGAA CATCCGCTAC
GGCCGCCCGA CCGCGACCGA CGACGAGGTG CTGCGCGCGG CGATCGCGGC ACGCTGCGAT
TTCGTCGAAA CGCTGCCGGA GGGGCTCGCC ACCATGGTCG GCGACCGCGG GGTCAAACTG
TCCGGCGGAC AGCGCCAACG CATCGCGATC GCCCGCGCTT TTCTCAAGGA CGCGCCGATC
CTGTTGCTCG ACGAGGCGAC CGCGGCGCTC GACGGCGACT CCGAGGAAGC CATTCGCGAG
GCGCTCGGCC GGCTGATGCG CGGCCGCACG GTGATCGCGA TCGCCCACCG CCTCGCAACA
CTACGCAACT TCGACAGGGT TGTTATGTTG CAGGCAGGGC GTATCATTGA AGACGGGCCG
CCCGGTCACT TGATGCAAAG GCAAGGGCCC TATCGCGATC TCGTGGACCG CGAGATGAAC
CGTCTCGCCC CCCGCGCCGC CTGA
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| Protein sequence | MDTLSGYAHR PFAFVGRYLR QRPTAHAVIL LAVVAAVACS VGTQYGVKYL VDGLSSGPAN
GGHVWMALGF LVSLIAADNV LWRIASWTAS FTFVGVTGDL RRDIFRHLTG HAPSYFSDRL
PGMLTSRITA TSNAVFTVEN MLVWNVLPPC IATVAAIALI GTVSLPMAAG LTLVSALVVI
GVFHLAAAGK PLHDDFADKA AAVDGEMVDV INNMPLVRAF CGLGYEHARF DATVNRELTA
RGRSLRYLER LRLLHALVTV TLTVALLAWA VMLWQQGRAT TGDVVLVCTL GLSILHATRD
LAVALVDITQ HVARLSEALA TLLVPHELAD HPAAEPLVRS GAAIAFEDIK FRYPGGQKLF
EGLTLRIGAG QRVGLVGQSG GGKSSLFVLL QRFYDPQAGR ITIDGQDITR VTQQSLREAI
SVVPQDISLF HRSMLENIRY GRPTATDDEV LRAAIAARCD FVETLPEGLA TMVGDRGVKL
SGGQRQRIAI ARAFLKDAPI LLLDEATAAL DGDSEEAIRE ALGRLMRGRT VIAIAHRLAT
LRNFDRVVML QAGRIIEDGP PGHLMQRQGP YRDLVDREMN RLAPRAA
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