Gene RPC_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3203 
Symbol 
ID3972001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3547046 
End bp3547996 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID637926313 
Producthypothetical protein 
Protein accessionYP_533064 
Protein GI90424694 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.272252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.299347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCAA GCAGTCGGGG CGCGGCATTC GCATCATGGA GCCGTCGCCG GAGACCTGCG 
GCGCGCCACT ATGAAAGCCC GCGGATGAGT ACCAAGGCCG TCATCACCTG CTCGCTGAAC
GGCGTGTTGA CCGATCCGAA GCAGCACCAT GTGCCGGTGA CGCCGCAGGA GATGGCGCGC
GAGGCCAAGT CGGCCTACGA CGCCGGCGCC AGCGTCGTTC ACATCCATCT GCGCCGGCAG
GAGCCCGGCC AGGGCCATCT GCCGTCCTGG GACGTCGACG TGTCGCGCGA GATCCAGGAG
GCGATCCGGC AGGCTTGTCC CGGCATCATC ATCAACCACA CCACGGGGAC CGCGGGACCG
AACTATCAAG GCGCGCTGGA TTGCGTTCGC GAGACCAAGC CGGAGATGGC GGCCTGCAAC
GCCGGCTCGC TGAACTACCT CAAGGTCAAA GCCGACAAGA CATGGGCCTG GCCGCCGATG
ATGTTCGACA ACGCGGTGGA GAAGATCCAG GACTATCTCG ACGTGATGAA CGAGGCCGGT
ACGATGCCGG AGTTCGAATG TTTCGACGTC GGCATCGTGC GCTGCGTCGG GATGTATCGC
CAGACCGGGA TGTATTCCGG GCCGCTGGAC TACAATTTCG TGATGGGGGT GGCCTCCGGC
ATGCCGGCGG ATCCCGATCT GTTGCCGATT CTTTTGAAGC TGAAGACGAA GGACGCGCAG
TGGCAAGTCA CCGCGATCGG CCGCGCCGAG ATCTGGCCGC TGCACCAGCG CTGCGCCGAA
CTCGGCGGCC ACCTGCGCAC CGGTCTGGAA GACACGTTCT ATCTCGCCAG CGGCGAGAAG
GTCACCTCGA ACGGGCAATT GATCGAGGAA ATCGCCGGCT GCGCCAGGCG GGCGGGGCGC
GGCATCGCGT CGCCCGCCGA GGCGCGGGAG ATTTTTGGGT TGAAGCATTG A
 
Protein sequence
MDASSRGAAF ASWSRRRRPA ARHYESPRMS TKAVITCSLN GVLTDPKQHH VPVTPQEMAR 
EAKSAYDAGA SVVHIHLRRQ EPGQGHLPSW DVDVSREIQE AIRQACPGII INHTTGTAGP
NYQGALDCVR ETKPEMAACN AGSLNYLKVK ADKTWAWPPM MFDNAVEKIQ DYLDVMNEAG
TMPEFECFDV GIVRCVGMYR QTGMYSGPLD YNFVMGVASG MPADPDLLPI LLKLKTKDAQ
WQVTAIGRAE IWPLHQRCAE LGGHLRTGLE DTFYLASGEK VTSNGQLIEE IAGCARRAGR
GIASPAEARE IFGLKH