Gene RPC_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3166 
Symbol 
ID3972602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3510299 
End bp3510973 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID637926276 
Producthypothetical protein 
Protein accessionYP_533027 
Protein GI90424657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.610941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.516517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC CGATTGCCCC TCCCGTCGCG CTGTTCGGCC ACCGGCCGTT CCTGTTCTAT 
CTGTGGTCGC GCAGCTTTTC CCGATTCTCC AGCCAGATCG CCGCGGTGGC GGTCGGCTGG
CAAATCTATG AGATGACCGG CAGCGCCTTC GATCTCGGCA TGGTCGGGCT GGTGCAGTTT
GCGCCGACCG CAATCCTGGT GTTCGCGGCG GGCCACGCCG CCGACCGTTA CGATCGAAGG
CGGGTGGTGC AGCTGTGCCA GATCGCGCAG GGGCTTGCCG CGGCGTATCT GGCCTGGGGC
AGCTTTGCCG GCTGGATCAC GGTGCCGGAG ATCTTTGCCG CGGTGGCGGT GTTCGGCGCC
GCCACCGCGT TCGAAAGCCC GGCCGCGGCG GCGCTGCTGC CGGCCGTGGT GCCGACCGGG
ATGTTGCAGC GGGCGACTGC GGTGGCGACC GGCGTGTTCC AGATCGCCAC CATCACCGGG
CCTGCGCTCG GCGGCTTCGC CGATGCGGCG GCGCCGGCCG CGCCCTATGC GGTGATGGCG
CTGTTTTGGA TTGCGTCGGG GCTGTTCAGC GGCGCGATGC CGGCGGCATT GCTCGGCGGC
CTCGGCACCG TGCTGATCGC GCTATTGTGG ATGCGGCTGT TTCCGGCGCT GCGTAAGGTC
GAGCGACTGG AGTGA
 
Protein sequence
MSDPIAPPVA LFGHRPFLFY LWSRSFSRFS SQIAAVAVGW QIYEMTGSAF DLGMVGLVQF 
APTAILVFAA GHAADRYDRR RVVQLCQIAQ GLAAAYLAWG SFAGWITVPE IFAAVAVFGA
ATAFESPAAA ALLPAVVPTG MLQRATAVAT GVFQIATITG PALGGFADAA APAAPYAVMA
LFWIASGLFS GAMPAALLGG LGTVLIALLW MRLFPALRKV ERLE