Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3166 |
Symbol | |
ID | 3972602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3510299 |
End bp | 3510973 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637926276 |
Product | hypothetical protein |
Protein accession | YP_533027 |
Protein GI | 90424657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.610941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.516517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATC CGATTGCCCC TCCCGTCGCG CTGTTCGGCC ACCGGCCGTT CCTGTTCTAT CTGTGGTCGC GCAGCTTTTC CCGATTCTCC AGCCAGATCG CCGCGGTGGC GGTCGGCTGG CAAATCTATG AGATGACCGG CAGCGCCTTC GATCTCGGCA TGGTCGGGCT GGTGCAGTTT GCGCCGACCG CAATCCTGGT GTTCGCGGCG GGCCACGCCG CCGACCGTTA CGATCGAAGG CGGGTGGTGC AGCTGTGCCA GATCGCGCAG GGGCTTGCCG CGGCGTATCT GGCCTGGGGC AGCTTTGCCG GCTGGATCAC GGTGCCGGAG ATCTTTGCCG CGGTGGCGGT GTTCGGCGCC GCCACCGCGT TCGAAAGCCC GGCCGCGGCG GCGCTGCTGC CGGCCGTGGT GCCGACCGGG ATGTTGCAGC GGGCGACTGC GGTGGCGACC GGCGTGTTCC AGATCGCCAC CATCACCGGG CCTGCGCTCG GCGGCTTCGC CGATGCGGCG GCGCCGGCCG CGCCCTATGC GGTGATGGCG CTGTTTTGGA TTGCGTCGGG GCTGTTCAGC GGCGCGATGC CGGCGGCATT GCTCGGCGGC CTCGGCACCG TGCTGATCGC GCTATTGTGG ATGCGGCTGT TTCCGGCGCT GCGTAAGGTC GAGCGACTGG AGTGA
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Protein sequence | MSDPIAPPVA LFGHRPFLFY LWSRSFSRFS SQIAAVAVGW QIYEMTGSAF DLGMVGLVQF APTAILVFAA GHAADRYDRR RVVQLCQIAQ GLAAAYLAWG SFAGWITVPE IFAAVAVFGA ATAFESPAAA ALLPAVVPTG MLQRATAVAT GVFQIATITG PALGGFADAA APAAPYAVMA LFWIASGLFS GAMPAALLGG LGTVLIALLW MRLFPALRKV ERLE
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