Gene RPC_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3135 
Symbol 
ID3972784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3481532 
End bp3482086 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID637926244 
ProductMarR family transcriptional regulator 
Protein accessionYP_532996 
Protein GI90424626 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.16372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTC TGCGCACTGC CCACGACGAG GAGGGCGATC TTGCGGCTTC AACGGAGTCG 
CGCGGGCCAG CCGAGGCGGC TGAAGGGCAT CGGGATTTCG GCCTGTCGCA CCAGATCATC
TGGGACTTCG TCTCGATCAG CAATCACCTG GAAGATATCC GCCGGTCGTG GGCCAAGCTG
TTCGGCATCA GCGGATCGCA GTGGCTGATC CTGATGGCGA TCGACGACCT CGACCAGGGC
GGCGGTGTCT CGGTCGGCGA CGTCTCCGCC AAGATCCACG CGGTCTCCAC CTTCGTCACC
ACCCAGACCA AGGTTCTGGA ACGGCTGGGT CTGATCAATC GCGTGACCTC CGCGGCCGAT
GGTCGTGTGG TGCTGATGTC GCTGTCGGAC CGGGCGCGGC AGCAGATTTC CGACCTTTCC
GCCCGCTGGG AGGCGCTGCA CGCCTTTATC TTCCGCGATT TCGACGCCCA GTCGATGAAC
GACGTCAAAA GCAAACTCGA GATGCTGAAG AAGCGCGCCA AGATCGCGGT GGCGCGGGTC
GCGGTCGAGA GCTGA
 
Protein sequence
MPTLRTAHDE EGDLAASTES RGPAEAAEGH RDFGLSHQII WDFVSISNHL EDIRRSWAKL 
FGISGSQWLI LMAIDDLDQG GGVSVGDVSA KIHAVSTFVT TQTKVLERLG LINRVTSAAD
GRVVLMSLSD RARQQISDLS ARWEALHAFI FRDFDAQSMN DVKSKLEMLK KRAKIAVARV
AVES