Gene RPC_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3065 
Symbol 
ID3972886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3398696 
End bp3399067 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content64% 
IMG OID637926175 
Producthypothetical protein 
Protein accessionYP_532928 
Protein GI90424558 
COG category[S] Function unknown 
COG ID[COG5331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.100645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0433353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTC AGATGGTTCT GCTGCCGGTA TTCATGCTGG TGGCGCTCAC CCTGGCGATG 
CTGTTGTGGT CGGGGCGGGG ATCGCTCGGC GCGCGCGGCG ACACGATCGC AGCAACGACC
GAGCCGACCG TCGATCCGAT GCAACTGGCG GTGCTGTTCT ATGTGCTGAT CGCGATCGGA
CTGCCGCTGC GGCGGATCGA TCTGGTGCTG GTCATGCTGT CCTGGGTCTT CGTGGTGACG
CGGCTGGCCC ATGCCGGAGT GGTGGTGTCC TCCGGTGCGG CGGGCTTGCG CTCGCCGGCG
TATTTGTCCG GCGCTCTGGT GCTGTTGGCG ATGTGGGTCT ATTTCGCACT GCGAATCCTG
CTGCTGATCT GA
 
Protein sequence
MSVQMVLLPV FMLVALTLAM LLWSGRGSLG ARGDTIAATT EPTVDPMQLA VLFYVLIAIG 
LPLRRIDLVL VMLSWVFVVT RLAHAGVVVS SGAAGLRSPA YLSGALVLLA MWVYFALRIL
LLI