Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3051 |
Symbol | |
ID | 3973369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3380754 |
End bp | 3381557 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637926161 |
Product | hypothetical protein |
Protein accession | YP_532914 |
Protein GI | 90424544 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.54052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGGACT TTTCCGACAC GAGCTTTGCG GACTTTTTCA AGTCCGAGCT GAAGGTCGGC ATCGACGATC CCAAATACGC GGCGAATGGT GGCTCCAAGG GGAAGCGGCT GCGCTATTTT TTACAGAACT GTGACGACAC CGCAGCCGTC CGCGCGCTCA CCGCGCTCTG GGAGCACCGC ACCGAGTATA TCGCTCGTAG CGGCGGAAAG GATCCGGTGG TCGACGCGGC GTCGCGCTAT CAAGGCTTGA TCGATCGTCT GTCTAGCTGT GCGGCTACAA ACCCAGCCCG ACCGGCACCA GCGCCCATTC TCGATCGTCA GAAGATCCTG GCGATCAAGG CGGAGCTGCT GCGTATCTCA TCACTCGGCG CACAGGCACG CGGCTTCGCC TTTGAAGGAT TTCTCAAGAG CCTGTTCGAC GCCTTCGGCC TGGCAGCTCA GGAACCGTTC CGACTGCGGG GCGAACAGAT CGACGGCAGC TTCCACCTTG GAAACGACAC CTATCTGCTG GAAGCCAAAT GGCACGGCCA GCCCATCGGC GTCGCCGATC TCCACACGTT CCACGGTAAG ATCGAACAGA AGGCCGCCTG GACGCGGGGT CTATTCGTAA GCAACAGCGG TTTCTCCGAA GACGGCCTCG TCGCCTTCGG CCGAGGCAAG CGTGTCATCT GCATGGACGG CCTCGATCTC TACGAAATGC TCGACCGGAA GATACCGCTC AACCAGGTTC TTGAACGCAA GGTGCGAAGG GCTGCCGAAA CCGGCATGCC CTTCCTTCGC GTTCGCGACC TCTTCCCGAG CTAA
|
Protein sequence | MLDFSDTSFA DFFKSELKVG IDDPKYAANG GSKGKRLRYF LQNCDDTAAV RALTALWEHR TEYIARSGGK DPVVDAASRY QGLIDRLSSC AATNPARPAP APILDRQKIL AIKAELLRIS SLGAQARGFA FEGFLKSLFD AFGLAAQEPF RLRGEQIDGS FHLGNDTYLL EAKWHGQPIG VADLHTFHGK IEQKAAWTRG LFVSNSGFSE DGLVAFGRGK RVICMDGLDL YEMLDRKIPL NQVLERKVRR AAETGMPFLR VRDLFPS
|
| |