Gene RPC_3051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3051 
Symbol 
ID3973369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3380754 
End bp3381557 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID637926161 
Producthypothetical protein 
Protein accessionYP_532914 
Protein GI90424544 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.54052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGACT TTTCCGACAC GAGCTTTGCG GACTTTTTCA AGTCCGAGCT GAAGGTCGGC 
ATCGACGATC CCAAATACGC GGCGAATGGT GGCTCCAAGG GGAAGCGGCT GCGCTATTTT
TTACAGAACT GTGACGACAC CGCAGCCGTC CGCGCGCTCA CCGCGCTCTG GGAGCACCGC
ACCGAGTATA TCGCTCGTAG CGGCGGAAAG GATCCGGTGG TCGACGCGGC GTCGCGCTAT
CAAGGCTTGA TCGATCGTCT GTCTAGCTGT GCGGCTACAA ACCCAGCCCG ACCGGCACCA
GCGCCCATTC TCGATCGTCA GAAGATCCTG GCGATCAAGG CGGAGCTGCT GCGTATCTCA
TCACTCGGCG CACAGGCACG CGGCTTCGCC TTTGAAGGAT TTCTCAAGAG CCTGTTCGAC
GCCTTCGGCC TGGCAGCTCA GGAACCGTTC CGACTGCGGG GCGAACAGAT CGACGGCAGC
TTCCACCTTG GAAACGACAC CTATCTGCTG GAAGCCAAAT GGCACGGCCA GCCCATCGGC
GTCGCCGATC TCCACACGTT CCACGGTAAG ATCGAACAGA AGGCCGCCTG GACGCGGGGT
CTATTCGTAA GCAACAGCGG TTTCTCCGAA GACGGCCTCG TCGCCTTCGG CCGAGGCAAG
CGTGTCATCT GCATGGACGG CCTCGATCTC TACGAAATGC TCGACCGGAA GATACCGCTC
AACCAGGTTC TTGAACGCAA GGTGCGAAGG GCTGCCGAAA CCGGCATGCC CTTCCTTCGC
GTTCGCGACC TCTTCCCGAG CTAA
 
Protein sequence
MLDFSDTSFA DFFKSELKVG IDDPKYAANG GSKGKRLRYF LQNCDDTAAV RALTALWEHR 
TEYIARSGGK DPVVDAASRY QGLIDRLSSC AATNPARPAP APILDRQKIL AIKAELLRIS
SLGAQARGFA FEGFLKSLFD AFGLAAQEPF RLRGEQIDGS FHLGNDTYLL EAKWHGQPIG
VADLHTFHGK IEQKAAWTRG LFVSNSGFSE DGLVAFGRGK RVICMDGLDL YEMLDRKIPL
NQVLERKVRR AAETGMPFLR VRDLFPS