Gene RPC_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3028 
Symbol 
ID3973481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3327978 
End bp3329066 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content66% 
IMG OID637926139 
Producthypothetical protein 
Protein accessionYP_532892 
Protein GI90424522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.239362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCCG CGGCCGAGCT GGATTTCTCC AGTATCTATA AGACGTTTCG CTTCCGCCGG 
CTATGGCGCG CCGAACAGCG CGGGATGCTG TCAGACGCGA TGACTGCCCT GATGCTGGTC
ACAACGCTGC GGGTGACGCC TCTTGCCAGC GGCTGTTTGA CGGGCGCGCT GATGCAGCTC
CTATTCGCCG TGGCGCCGAC GAGATCGCTT TCAAGGACGG CAGCAGGCTG GCGTGAGTTG
GTGCGTGGCC AGCCTTCTCC CTCGTTGCTG ACCATGCTGG CTGCGATGAC ACTGTCGGGC
TGCGCGACGG CGCCGCTTGT CCAAGGTACG GGTCTGTCGT CCTATGACGG ACTGCAGCAG
TCGGACGGAA AGATCACCAA GTCGCGCCTT CACGTCAAGA AGGAGCAGGT CGCAGCCGCC
AAGACGATCA ACATCGCCCC CACGCTGTTT CCCCCTAACG CTGCGCCGAC GTTGTCGAGC
GAGCAGCGAG CGCTGGTCGC CAACGCCGTG AACCGCGCAC TTTGCATCAG CCTCAGCGAT
CGCTTCGAGG TGATCGCGGC GGGACGTCCG GCAGACCTCA CCGTTCGGGC AGCCGTCACC
CATGCCACGG AGACCGACGA GGCCGCGGCG GGGGTCTCGG TCGCGGCGTC GATCGGGACG
AAGTTCGTCG ATATGGGCAG CGTTCCGATC CCGATCCCGC GCGTCCCGAT CGGCCTGGGA
GAGTTGTCGA TCGAAGCAGA AGCGGTCGAT CGCGGCGGCC GGCAGCAGGC GGCGATCGTC
TGGGCCAGAG GCGCAACCGC GTTCTTCAGT TCGCCCCGGG TATCGAAAGC GGGTGACGCT
TACGAGCTCG CAGGATCTTT CGGCGAAGAT TTCGCGACGC TGCTCAACAA GGGCGAGAGC
CCGTTCGGCG GCGTCGGCTT CAGCGTTCCG TCCTGGCAGA AGATCAGCTC GAATGTGGGG
CTCGCGCCGA AGTACGCGGC GTGTGAGAGC TATGGGCGCT CGCCTGGCGT CGCTGGCCTG
GTCGGCGGCA AGCTCGGGTT TCCGCCCGAA TGGACCGATG ACGGCGCAAA CAGCGCTGCA
ACCCGCTGA
 
Protein sequence
MRSAAELDFS SIYKTFRFRR LWRAEQRGML SDAMTALMLV TTLRVTPLAS GCLTGALMQL 
LFAVAPTRSL SRTAAGWREL VRGQPSPSLL TMLAAMTLSG CATAPLVQGT GLSSYDGLQQ
SDGKITKSRL HVKKEQVAAA KTINIAPTLF PPNAAPTLSS EQRALVANAV NRALCISLSD
RFEVIAAGRP ADLTVRAAVT HATETDEAAA GVSVAASIGT KFVDMGSVPI PIPRVPIGLG
ELSIEAEAVD RGGRQQAAIV WARGATAFFS SPRVSKAGDA YELAGSFGED FATLLNKGES
PFGGVGFSVP SWQKISSNVG LAPKYAACES YGRSPGVAGL VGGKLGFPPE WTDDGANSAA
TR